INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
ON081335	Mycobacterium phage CindyLou	157677	64.593	Mycobacterium	Group I	Bixzunavirus	Bixzunavirus	Ceeclamvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.830	AAI-based (high-confidence)	Bixzunavirus	Bixzunavirus quasimodo	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON081334	Microbacterium phage Pondwater	17362	68.512	Microbacterium	Group I	Paopuvirus	Paopuvirus	Pelczarvirinae	Orlajensenviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	99.780	AAI-based (high-confidence)	Paopuvirus	Paopuvirus paopu	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON081333	Gordonia phage Axumite	61714	70.185	Gordonia	Group I	Westmeadvirus	Westmeadvirus	Santaclaravirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Ligmavirus	Ligmavirus ligma	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
ON081332	Gordonia phage ChadMasterC	59685	67.729	Gordonia	Group I	Vividuovirus	Vividuovirus	Schenleyvirinae	Stackebrandtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae CAG3	High-quality	High-quality	100.000	AAI-based (high-confidence)	Vividuovirus	Vividuovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON081331	Mycobacterium phage Ganymede	59719	66.471	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.580	AAI-based (high-confidence)	Anayavirus	Anayavirus adonis	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40;immunity orf_42
ON081330	Microbacterium phage Savannah	53396	68.865	Microbacterium	Group I	Quhwahvirus	Quhwahvirus	Unclassified	Hodgkinviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	99.430	AAI-based (high-confidence)	Quhwahvirus	Quhwahvirus pulchra	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON081329	Mycobacterium phage Pokerus	59775	66.601	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.670	AAI-based (high-confidence)	Anayavirus	Anayavirus JAWS	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40;immunity orf_42
ON081328	Microbacterium phage Morrill	53883	59.169	Microbacterium	Group I	Akonivirus	Akonivirus	Eekayvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	98.940	AAI-based (high-confidence)	Akonivirus	Akonivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON081052	Escherichia phage vB_EcoS_SCS31	46054	43.501	Escherichia	Group I	Guelphvirus	Guelphvirus	Braunvirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	Guelphvirus	Guelphvirus SCS31	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
ON080941	Vibrio phage F23s2	43386	49.362	Vibrio	Group I	Maculvirus	Maculvirus	Unclassified	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio parahaemolyticus	Complete	High-quality	100.000	DTR (high-confidence)	Maculvirus	Maculvirus F23s2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic