INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
ON456338	Streptomyces phage Stuff	54082	68.409	Streptomyces	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces griseus ATCC 10137	High-quality	High-quality	99.680	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
ON456337	Gordonia Phage Sampson	60152	67.710	Gordonia	Group I	Zitchvirus	Zitchvirus	Schenleyvirinae	Stackebrandtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Zitchvirus	Zitchvirus sampson	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON456336	Gordonia Phage StorminNorm	58248	68.317	Gordonia	Group I	Kroosvirus	Kroosvirus	Schenleyvirinae	Stackebrandtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	99.120	AAI-based (high-confidence)	Kroosvirus	Kroosvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
ON456335	Arthrobacter phage Trustiboi	58242	49.957	Arthrobacter	Group I	Gordonvirus	Gordonvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sp. ATCC 21022	High-quality	High-quality	100.000	AAI-based (high-confidence)	Gordonvirus	Gordonvirus trustiboi	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON456334	Gordonia phage Periwinkle	55657	62.909	Gordonia	Group I	Getalongvirus	Getalongvirus	Langleyhallvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Getalongvirus	Getalongvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_53
ON456333	Gordonia phage StarStruck	68128	65.393	Gordonia	Group I	Kablunavirus	Kablunavirus	Emilbogenvirinae	Zierdtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kablunavirus	Kablunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON456332	Mycobacterium phage Virgeve	68046	66.483	Mycobacterium	Group I	Pegunavirus	Pegunavirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.940	AAI-based (high-confidence)	Pegunavirus	Pegunavirus apizium	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON456331	Gordonia phage PokyPuppy	77065	59.061	Gordonia	Group I	Montyvirus	Montyvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia rubripertincta NRRL B-16540	Complete	High-quality	100.000	DTR (high-confidence)	Montyvirus	Montyvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON456330	Mycobacterium phage MelsMeow	68563	66.381	Mycobacterium	Group I	Pegunavirus	Pegunavirus	Bclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.690	AAI-based (high-confidence)	Pegunavirus	Pegunavirus oline	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON456151	Listeria phage HB17054	42079	36.721	Listeria	Group I	Aquingentivirus	Aquingentivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Listeria monocytogenes ATCC 19115	Complete	High-quality	100.000	DTR (high-confidence)	Aquingentivirus	Aquingentivirus HB17054	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_25;cro orf_30;antirepressor orf_39