INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
ON932084	Xanthomonas phage vB_Xar_IVIA-DoCa10	64024	65.461	Xanthomonas	Group I	Bosavirus	Bosavirus	Bradleyvirinae	Mesyanzhinovviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bosavirus	Bosavirus Doca10	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_6
ON932083	Xanthomonas phage vB_Xar_IVIA-DoCa9	43240	62.865	Xanthomonas	Group I	Pradovirus	Pradovirus	Gujervirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	High-quality	High-quality	97.310	AAI-based (high-confidence)	Pradovirus	Pradovirus IVIADoCa9	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON932082	Xanthomonas phage vB_Xar_IVIA-DoCa8	43697	54.413	Xanthomonas	Group I	Septimatrevirus	Septimatrevirus	Jondennisvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	High-quality	High-quality	100.000	AAI-based (high-confidence)	Septimatrevirus	Septimatrevirus DoCa1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON932081	Xanthomonas phage vB_Xar_IVIA-DoCa7	42881	59.378	Xanthomonas	Group I	Paternavirus	Paternavirus	Unclassified	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	Complete	High-quality	100.000	DTR (high-confidence)	Paternavirus	Paternavirus doca7	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON932080	Xanthomonas phage vB_Xar_IVIA-DoCa6	62951	66.977	Xanthomonas	Group I	Bosavirus	Bosavirus	Bradleyvirinae	Mesyanzhinovviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bosavirus	Bosavirus Doca6	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
ON932079	Xanthomonas phage vB_Xar_IVIA-DoCa5	56408	59.614	Xanthomonas	Group I	Docaquintavirus	Docaquintavirus	Bradleyvirinae	Mesyanzhinovviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	High-quality	High-quality	91.600	AAI-based (high-confidence)	Docaquintavirus	Docaquintavirus doca5	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_4
ON932078	Xanthomonas phage vB_Xar_IVIA-DoCa4	43007	62.864	Xanthomonas	Group I	Pradovirus	Pradovirus	Gujervirinae	Autonotataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas arboricola pv. juglandis IVIA 1317-1a	High-quality	High-quality	96.770	AAI-based (high-confidence)	Pradovirus	Pradovirus IVIADoCa4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON922990	Vibrio phage VPMCC14	134472	34.520	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio sp.	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
ON922920	Salmonella phage vB_SalS_PC192	39095	48.290	Salmonella	Group I	Berlinvirus	Berlinvirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella sp.	Complete	High-quality	100.000	DTR (high-confidence)	Berlinvirus	Berlinvirus PC127	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON922919	Escherichia phage vB_EcoM_PD205	71789	42.954	Escherichia	Group I	Gamaleyavirus	Gamaleyavirus	Enquatrovirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia sp.	Complete	High-quality	100.000	DTR (high-confidence)	Gamaleyavirus	Gamaleyavirus Pd205	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic