INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OP394141 | Salmonella phage GSP044 | 110563 | 39.265 | Salmonella | Group I | Tequintavirus | Tequintavirus | Markadamsvirinae | Demerecviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | Complete | High-quality | 100.000 | DTR (high-confidence) | Tequintavirus | Tequintavirus GSP044 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OP389270 | Salmonella phage MET_P1_001_43 | 43205 | 50.022 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Enteritidis | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Jerseyvirus | Jerseyvirus METP100143 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP381444 | Clostridium phage P21 | 51995 | 34.196 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium perfringens ZWCP 21 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP381185 | Megaira polyxenophila phage MAnkyphage_25.80 | 38448 | 33.934 | Megaira | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Candidatus Megaira polyxenophila | High-quality | High-quality | 91.590 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP380607 | Aeromonas phage avDM11-UST | 37561 | 53.643 | Aeromonas | Group I | Teseptimavirus | Teseptimavirus | Studiervirinae | Autotranscriptaviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila BIOTECH 10089 | Complete | High-quality | 100.000 | DTR (high-confidence) | Ebriosvirus | Ebriosvirus IME15 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP380606 | Aeromonas phage avDM1 | 174828 | 43.756 | Aeromonas | Group I | Biquartavirus | Biquartavirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila BIOTECH 10089 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Biquartavirus | Biquartavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP380605 | Aeromonas phage avDM2 | 173642 | 43.739 | Aeromonas | Group I | Biquartavirus | Biquartavirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila BIOTECH 10089 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Biquartavirus | Biquartavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP380604 | Aeromonas phage avDM12-TAAL | 231190 | 42.208 | Aeromonas | Group I | Chrysonvirus | Chrysonvirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila BIOTECH 10089 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Cinqassovirus | Cinqassovirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OP380603 | Aeromonas phage avDM9-HANS | 171254 | 43.160 | Aeromonas | Group I | Biquartavirus | Biquartavirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila BIOTECH 10089 | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic | |
| OP380602 | Aeromonas phage avDM5 | 173776 | 43.745 | Aeromonas | Group I | Biquartavirus | Biquartavirus | Unclassified | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas hydrophila BIOTECH 10089 | Complete | High-quality | 100.000 | DTR (high-confidence) | Biquartavirus | Biquartavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |