INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP423032	Salmonella phage vB_Hercules_SET	157338	44.925	Salmonella	Group I	Kuttervirus	Kuttervirus	Cvivirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica serovar Typhimurium	High-quality	High-quality	99.560	AAI-based (high-confidence)	Kuttervirus	Kuttervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP422637	Pseudomonas phage BUCT-PX-5	42828	53.631	Pseudomonas	Group I	Septimatrevirus	Septimatrevirus	Jondennisvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa	High-quality	High-quality	100.000	AAI-based (high-confidence)	Septimatrevirus	Septimatrevirus PX5	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP413832	Klebsiella phage pKP-BS317-1.1	48933	50.220	Klebsiella	Group I	Webervirus	Webervirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae BS317-1	Complete	High-quality	100.000	DTR (high-confidence)	Webervirus	Webervirus pKPBS31711	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP413831	Klebsiella phage pKP-BM327-1.1	76442	44.209	Klebsiella	Group I	Efbeekayvirus	Efbeekayvirus	Waldeevirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae BM327-1	Complete	High-quality	100.000	DTR (high-confidence)	Efbeekayvirus	Efbeekayvirus Bm32711	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_16
OP413830	Klebsiella phage pKV-BS375-3.1	45617	51.851	Klebsiella	Group I	Gansuvirus	Gansuvirus	Molineuxvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae BS375-3	Complete	High-quality	100.000	DTR (high-confidence)	Gansuvirus	Gansuvirus pKVBS37531	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP413829	Klebsiella phage pKP-M186-2.2	44728	53.830	Klebsiella	Group I	Drulisvirus	Drulisvirus	Slopekvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae M186-2	Complete	High-quality	100.000	DTR (high-confidence)	Drulisvirus	Drulisvirus pKPM18622	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP413828	Klebsiella phage pKP-M186-2.1	42894	50.998	Klebsiella	Group I	Ulipvirus	Ulipvirus	Molineuxvirinae	Autosignataviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae M186-2	High-quality	High-quality	96.180	AAI-based (high-confidence)	Ulipvirus	Ulipvirus pKPM18621	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP413827	Klebsiella phage pKP-BM327-1.2	76991	44.158	Klebsiella	Group I	Efbeekayvirus	Efbeekayvirus	Waldeevirinae	Schitoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella pneumoniae BM327-1	Complete	High-quality	100.000	DTR (high-confidence)	Efbeekayvirus	Efbeekayvirus Bm32712	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_34
OP413789	Xanthomonas phage ZP3	44713	52.191	Xanthomonas	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Xanthomonas oryzae pv. oryzae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Xipdecavirus	Xipdecavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP394178	Cyanophage MaMV-DH01	182372	45.599	Unspecified	Group I	Fukuivirus	Fukuivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Cyanobacteria	High-quality	High-quality	100.000	AAI-based (high-confidence)	Fukuivirus	Fukuivirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	antirepressor orf_9;integrase orf_211