INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OP484857 | Sinorhizobium phage AP-16-3 | 61037 | 59.225 | Sinorhizobium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Sinorhizobium meliloti | High-quality | High-quality | 98.280 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OP484850 | Salmonella phage vB_SalP_LDW16 | 43359 | 49.459 | Salmonella | Group I | Jerseyvirus | Jerseyvirus | Guernseyvirinae | Sarkviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | Complete | High-quality | 100.000 | DTR (high-confidence) | Jerseyvirus | Jerseyvirus LDW16 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP484843 | Aeromonas phage A051 | 32212 | 60.546 | Aeromonas | Group I | Bielevirus | Bielevirus | Unclassified | Peduoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas sp. | High-quality | High-quality | 94.780 | AAI-based (high-confidence) | Bielevirus | Bielevirus A051 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_16 |
| OP481875 | Klebsiella phage vB_Kpn_ZC2 | 48258 | 47.677 | Klebsiella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Klebsiella pneumoniae KP-08 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | Query is a new genus and species. You could try running again with if you larger distance | lytic | |
| OP481051 | Alteromonas phage vB_AemP_PT15-A5 | 75104 | 38.083 | Alteromonas | Group I | Aquintavirus | Aquintavirus | Unclassified | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Alteromonas mediterranea PT15 | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | Aquintavirus | Aquintavirus A5 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP480063 | Erwinia phage pEa_SNUABM_56 | 147321 | 48.706 | Erwinia | Group I | Henunavirus | Henunavirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora TS3128 | High-quality | High-quality | 99.560 | AAI-based (high-confidence) | Henunavirus | Henunavirus SNUABM01 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP480062 | Erwinia phage pEa_SNUABM_55 | 146979 | 48.769 | Erwinia | Group I | Henunavirus | Henunavirus | Vequintavirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Erwinia amylovora TS3128 | High-quality | High-quality | 99.320 | AAI-based (high-confidence) | Henunavirus | Henunavirus SNUABM01 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OP455940 | Latilactobacillus phage TMW 1.46 P2 | 36412 | 40.044 | Latilactobacillus | Group I | Trabyvirinae | Unclassified | Trabyvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Latilactobacillus sakei TMW 1.46 | Medium-quality | Genome-fragment | 88.440 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_12;antirepressor orf_24 |
| OP455939 | Latilactobacillus phage TMW 1.46 P1 | 39625 | 40.785 | Latilactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Latilactobacillus sakei TMW 1.46 | High-quality | High-quality | 100.000 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_8;antirepressor orf_17 |
| OP455938 | Latilactobacillus phage TMW 1.1397 P1 | 38309 | 38.926 | Latilactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Latilactobacillus sakei TMW 1.1397 | High-quality | High-quality | 91.790 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_16 |