INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP503975	Paenibacillus phage FutureBee	44417	42.979	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae TP	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_35
OP503974	Paenibacillus phage Dante	44420	42.978	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae WAI	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503973	Paenibacillus phage Carlos	44430	42.982	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	76.420	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_35
OP503972	Paenibacillus phage Bob	43553	43.026	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F2B	Medium-quality	Genome-fragment	75.510	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503971	Paenibacillus phage Bloomfield	44419	42.977	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503970	Paenibacillus phage ApiWellbeing	44429	43.008	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	76.420	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503969	Paenibacillus phage AJG77	44417	42.984	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503968	Paenibacillus phage ABAtENZ	44419	42.970	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae 2017	Medium-quality	Genome-fragment	76.400	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP503543	Paenibacillus phage BarryFoster_Benicio	44421	42.975	Paenibacillus	Group I	Gochnauervirinae	Unclassified	Gochnauervirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Paenibacillus larvae F1A	Medium-quality	Genome-fragment	76.410	HMM-based (lower-bound)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_30;antirepressor orf_34
OP495736	Klebsiella phage vB_KmiS-Kmi2C	42234	39.033	Klebsiella	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Klebsiella michiganensis PS_Koxy2	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic