INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Explore INPHARED2 data visually

Create interactive summaries of genome metadata and download the resulting figures.

Open graphs

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

Host (NCBI)

Family (NCBI)

Genus (TaxMyPhage)

CheckV quality

PhageLeads lifestyle

Rows

Clear

Choose fields for download

37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OP589309	Leptolyngbya phage LPP-1	41561	52.128	Leptolyngbya	Group I	Morrisvirus	Morrisvirus	Unclassified	Saffermanviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Leptolyngbya boryana IU 594	Complete	High-quality	100.000	DTR (high-confidence)	Morrisvirus	Morrisvirus LPP1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP589283	Shewanella phage FishSpeaker	203356	38.960	Shewanella	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Shewanella oneidensis MR-1	Complete	High-quality	100.000	DTR (medium-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
OP588919	Curvibacter phage PCA1	57756	55.231	Curvibacter	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Curvibacter sp. AEP1.3	Complete	High-quality	100.000	DTR (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_24
OP588643	Rhodobacter phage Jorvik	8762	62.394	Rhodobacter	Unclassified	Anticleavirus	Anticleavirus	Unclassified	Mestraviridae	Vinavirales	Belvinaviricetes	Produgelaviricota	Abadenavirae	Varidnaviria	Rhodobacter capsulatus strain B10, ATCC 33303	Low-quality	Genome-fragment	5.520	HMM-based (lower-bound)	Anticleavirus	Anticleavirus jorvik	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP586623	Erwinia phage IT22	174346	38.386	Erwinia	Group I	Risoevirus	Risoevirus	Tevenvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Erwinia amylovora PGL Z1	High-quality	High-quality	99.160	AAI-based (high-confidence)	Risoevirus	Risoevirus cronus	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_78
OP585105	Acinetobacter phage vB_AbaM_CP14	102099	37.364	Acinetobacter	Group I	Saclayvirus	Saclayvirus	Unclassified	Luriaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii AB14	High-quality	High-quality	98.270	AAI-based (high-confidence)	Saclayvirus	Saclayvirus CP14	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP585104	Acinetobacter phage vB_AbaM_BP10	44443	37.263	Acinetobacter	Group I	Ganjingzivirus	Ganjingzivirus	Unclassified	Hirszfeldviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii AB10	High-quality	High-quality	98.930	AAI-based (high-confidence)	Ganjingzivirus	Ganjingzivirus BP10	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP585103	Acinetobacter phage vB_AbaM_DP45	164031	36.770	Acinetobacter	Group I	Lazarusvirus	Lazarusvirus	Twarogvirinae	Straboviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Acinetobacter baumannii AB5	High-quality	High-quality	98.090	AAI-based (high-confidence)	Lazarusvirus	Lazarusvirus am101	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OP584904	Staphylococcus phage phiSa2wa-st2974	45452	33.235	Staphylococcus	Group I	Triavirus	Triavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus subsp. aureus 20624 ST2974-MRSA-V	High-quality	High-quality	97.870	AAI-based (high-confidence)	Triavirus	Triavirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;cro orf_6;integrase orf_31
OP584903	Staphylococcus phage phiSa2wa-st1232	45907	33.126	Staphylococcus	Group I	Triavirus	Triavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus subsp. aureus 20417 ST1232-MRSA-V	Complete	High-quality	100.000	DTR (high-confidence)	Triavirus	Triavirus P240	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_1;integrase orf_31