Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
PZ019800Xanthomonas phage vXeeB-P8B4742462.913XanthomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Xanthomonas euvesicatoria pv. euvesicatoriaHigh-qualityHigh-quality100.000AAI-based (high-confidence) BeograduvirusBeograduvirus BsXeuCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ019799Xanthomonas phage vXeeB-P4A4789262.940XanthomonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Xanthomonas euvesicatoria pv. euvesicatoriaHigh-qualityHigh-quality100.000AAI-based (high-confidence) BeograduvirusBeograduvirus BsXeuCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_3
PZ019086Escherichia phage Wasif16981035.576EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli S87High-qualityHigh-quality100.000AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ019085Escherichia phage Anabia16843137.649EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli S87High-qualityHigh-quality99.320AAI-based (high-confidence) MosigvirusMosigvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ019084Escherichia phage Rayhan16640635.570EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli S87High-qualityHigh-quality98.930AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
PZ019083Escherichia phage Azraf4114250.972EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli S87High-qualityHigh-quality95.760AAI-based (high-confidence) KagunavirusKagunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PZ019082Escherichia phage Ayan4061350.954EscherichiaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Escherichia coli S87High-qualityHigh-quality94.660AAI-based (high-confidence) KagunavirusKagunavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
PZ014354Salmonella phage vB_PhiESI4649049.310SalmonellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_11;cro orf_18;integrase orf_70
PZ013371Achromobacter phage Marine122565650.222AchromobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Achromobacter sp.CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_245
PZ013370Achromobacter phage Prosecco4028863.716AchromobacterUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Achromobacter sp.High-qualityHigh-quality98.130AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
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