INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PZ445135 | Salmonella phage salpha11 | 86506 | 38.777 | Salmonella | Group I | Felixounavirus | Felixounavirus | Ounavirinae | Andersonviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Agona PGG025 | High-quality | High-quality | 98.260 | AAI-based (high-confidence) | Felixounavirus | Felixounavirus RPN213 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ445134 | Escherichia phage ecopha55 | 169719 | 37.621 | Escherichia | Group I | Mosigvirus | Mosigvirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli PGG016 | High-quality | High-quality | 99.860 | AAI-based (high-confidence) | Mosigvirus | Mosigvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| PZ444902 | Mammaliicoccus phage PG_92 | 54528 | 33.667 | Mammaliicoccus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Mammaliicoccus sciuri C688 | High-quality | High-quality | 98.910 | AAI-based (high-confidence) | temperate | integrase orf_29;antirepressor orf_50 | |||
| PZ444901 | Staphylococcus phage ILRIcamel_96 | 42525 | 35.182 | Staphylococcus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Staphylococcus epidermidis IVB6194 | High-quality | High-quality | 98.640 | AAI-based (high-confidence) | temperate | integrase orf_29;cro orf_33;antirepressor orf_35 | |||
| PZ444900 | Staphylococcus phage ILRIcamel_95 | 43917 | 34.488 | Staphylococcus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Staphylococcus epidermidis IVB6194 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_30;antirepressor orf_34 | |||
| PZ444899 | Mammaliicoccus phage PHAROH_97 | 41284 | 34.582 | Mammaliicoccus | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Mammaliicoccus sciuri C2865 | High-quality | High-quality | 92.050 | AAI-based (medium-confidence) | temperate | antirepressor orf_33 | |||
| PZ440644 | Morganella phage vB_MmoS_MM149 | 44641 | 45.673 | Morganella | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Morganella morganii 2025149N | Complete | High-quality | 100.000 | DTR (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| PZ440643 | Vibrio phage vB_ValS_R36H | 75854 | 48.827 | Vibrio | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Vibrio alginolyticus NBRC 15630 = ATCC 17749 | High-quality | High-quality | 98.970 | AAI-based (high-confidence) | Mardecavirus | Mardecavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| PZ440642 | Pseudomonas phage PA1019 | 94085 | 55.177 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa PAO1 | Complete | High-quality | 100.000 | DTR (high-confidence) | Samunavirus | Samunavirus SM1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_101 |
| PZ440639 | Agrobacterium phage Offa | 150723 | 46.668 | Agrobacterium | Group I | Heverleevirus | Heverleevirus | Unclassified | Pootjesviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Agrobacteriun tumefaciens | High-quality | High-quality | 99.460 | AAI-based (high-confidence) | Heverleevirus | Heverleevirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |