Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OQ570641Citrobacter phage YZU-L111501439.948CitrobacterGroup I EpseptimavirusEpseptimavirusMarkadamsvirinaeDemerecviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter freundiiCompleteHigh-quality100.000DTR (high-confidence) EpseptimavirusEpseptimavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OQ561750Escherichia phage LHE8317046439.585EscherichiaGroup I DhakavirusDhakavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BL21 (DE3)High-qualityHigh-quality100.000AAI-based (high-confidence) DhakavirusDhakavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ560327Microcystis phage Mel-Yong916-117105159.530MicrocystisUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Microcystis elabensHigh-qualityHigh-quality93.750HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
OQ560326Dolichospermum phage Dfl-Yong418-16920935.979DolichospermumUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Dolichospermum flos-aquaeHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OQ560325Leptolyngbya phage Pbo-Yong402-14322946.316LeptolyngbyaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Leptolyngbya boryanaHigh-qualityHigh-quality99.950AAI-based (high-confidence) WumptrevirusWumptrevirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ557157Staphylococcus phage vB_SauH_SPJ214284629.880StaphylococcusGroup I SilviavirusSilviavirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusCompleteHigh-quality100.000DTR (high-confidence) SilviavirusSilviavirus stau2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ555808Mycobacterium phage Nanz1976266366.483MycobacteriumGroup I AnayavirusAnayavirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) AnayavirusAnayavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_41;immunity orf_43
OQ555404Escherichia phage vB_EcoP_HC-259227004242.138EscherichiaGroup I KuravirusKuravirusGordonclarkvirinaeMtkvariviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia sp. HC-25922High-qualityHigh-quality91.720AAI-based (high-confidence) SuseptimavirusSuseptimavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ555403Pseudomonas phage vB_PaeM_Ty5005144.780PseudomonasGroup I PaundecimvirusPaundecimvirusUnclassifiedZobellviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.780AAI-based (high-confidence) PaundecimvirusPaundecimvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OQ555396Aeromonas virus AHPMCC114243958.894AeromonasUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Aeromonas hydrophila MTCC1739High-qualityHigh-quality100.000AAI-based (high-confidence) AhphunavirusAhphunavirus P2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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