INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OQ672747	Streptomyces phage phiScoe3	48350	65.597	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor	High-quality	High-quality	96.160	AAI-based (high-confidence)	Camvirus	Camvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_29
OQ672746	Streptomyces phage phiScoe25	49465	66.128	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor	High-quality	High-quality	98.380	AAI-based (high-confidence)	Camvirus	Camvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_28;integrase orf_51
OQ672745	Streptomyces phage phiScoe23	49768	65.839	Streptomyces	Group I	Likavirus	Likavirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor	High-quality	High-quality	98.320	AAI-based (high-confidence)	Likavirus	Likavirus izzy	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_28;integrase orf_46
OQ672744	Streptomyces phage phiScoe2	49387	65.768	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor	High-quality	High-quality	98.670	AAI-based (high-confidence)	Camvirus	Camvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_29;integrase orf_50
OQ672743	Streptomyces phage phiScoe15	49356	66.067	Streptomyces	Group I	Camvirus	Camvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor	High-quality	High-quality	98.510	AAI-based (high-confidence)	Camvirus	Camvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	immunity orf_28;integrase orf_49
OQ672742	Streptomyces phage phiScoe10	51094	65.233	Streptomyces	Group I	Arquatrovirinae	Unclassified	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces coelicolor	High-quality	High-quality	100.000	AAI-based (high-confidence)	Camvirus	Camvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_51
OQ672741	Streptomyces phage phiScoe1	51041	66.827	Streptomyces	Group I	Sentinelvirus	Sentinelvirus	Arquatrovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptomyces avermitilis	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sentinelvirus	Sentinelvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	immunity orf_31;integrase orf_49
OQ660438	Salmonella phage S4lw	42250	49.699	Salmonella	Group I	Jerseyvirus	Jerseyvirus	Guernseyvirinae	Sarkviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella sp.	Complete	High-quality	100.000	DTR (high-confidence)	Jerseyvirus	Jerseyvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ660437	Salmonella phage D5lw	157399	44.733	Salmonella	Group I	Kuttervirus	Kuttervirus	Cvivirinae	Ackermannviridae	Pantevenvirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella sp.	Complete	High-quality	100.000	DTR (high-confidence)	Kuttervirus	Kuttervirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OQ658779	Staphylococcus phage vB_Sa_2868B2	17733	28.833	Staphylococcus	Group I	Rosenblumvirus	Rosenblumvirus	Rakietenvirinae	Rountreeviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus 2868B2	High-quality	High-quality	100.000	AAI-based (high-confidence)	Rosenblumvirus	Rosenblumvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic