Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OR225222Sphingomonas phage Kimi4369955.864SphingomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Sphingomonas sp. LR55High-qualityHigh-quality98.440AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OR220913Methanosarcina spherical virus1056438.480MethanosarcinaGroup I TectiviridaeUnclassifiedUnclassifiedTectiviridaeKalamaviralesTectiliviricetesPreplasmiviricotaBamfordviraeVaridnaviria Methanosarcina mazei Go1Low-qualityGenome-fragment25.140HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
OR220912Methanosarcina spherical virus1056238.449MethanosarcinaGroup I TectiviridaeUnclassifiedUnclassifiedTectiviridaeKalamaviralesTectiliviricetesPreplasmiviricotaBamfordviraeVaridnaviria Methanosarcina mazei Go1Low-qualityGenome-fragment25.130HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
OR220911Methanosarcina spherical virus1056538.495MethanosarcinaGroup I TectiviridaeUnclassifiedUnclassifiedTectiviridaeKalamaviralesTectiliviricetesPreplasmiviricotaBamfordviraeVaridnaviria Methanosarcina mazei Go1Low-qualityGenome-fragment25.140HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingslytic
OR211677Pseudomonas phage vB_PaM_EPA39355849.316PseudomonasGroup I PakpunavirusPakpunavirusSkurskavirinaeVandenendeviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1CompleteHigh-quality100.000DTR (high-confidence) PakpunavirusPakpunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_88
OR209256Stenotrophomonas phage c9-N4317059.836StenotrophomonasGroup I SmasvirusSmasvirusGujervirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Stenotrophomonas maltophilia c9High-qualityHigh-quality100.000AAI-based (high-confidence) SmasvirusSmasvirus c9NCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR208619Pseudomonas phage vB_PaeA_SB4311462.177PseudomonasGroup I PhikmvvirusPhikmvvirusKrylovirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PAO1High-qualityHigh-quality100.000AAI-based (high-confidence) PhikmvvirusPhikmvvirus SBCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR208547Bacillus phage phi18-26446747.415BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis 18CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_2;integrase orf_33
OR206057Staphylococcus phage vB_SauS_PHM4263433.795StaphylococcusGroup I TriavirusTriavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria methicillin-resistant Staphylococcus aureusHigh-qualityHigh-quality91.770AAI-based (high-confidence) TriavirusTriavirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_8;integrase orf_40;cro orf_43;antirepressor orf_45
OR204652Escherichia phage pO1114044448.650EscherichiaGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) TeseptimavirusTeseptimavirus pO111Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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