Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OR545055Yersinia phage vB_YpM_444903744.650YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia pestis EV76-CNHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_29
OR545054Yersinia phage vB_YpM_414912844.604YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia pestis EV76-CNHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_29
OR545053Yersinia phage vB_YpM_394902744.437YersiniaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Yersinia pestis EV76-CNHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_28
OR544956Escherichia phage vB_EcoM_EP5713072338.976EscherichiaGroup I PhapecoctavirusPhapecoctavirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli O157:H7Medium-qualityGenome-fragment86.250AAI-based (high-confidence) PhapecoctavirusPhapecoctavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR544955Escherichia phage vB_EcoP_EP32B15669837.600EscherichiaGroup I MosigvirusMosigvirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli O157:H7CompleteHigh-quality100.000DTR (high-confidence) MosigvirusMosigvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR544954Escherichia phage vB_EcoM_EP32a16390637.614EscherichiaGroup I MosigvirusMosigvirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli O157:H7High-qualityHigh-quality96.640AAI-based (high-confidence) MosigvirusMosigvirus mar005p1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OR544140Pasteurella phage Pmp92077140.321PasteurellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pasteurella multocida Past9Medium-qualityGenome-fragment56.110AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OR544139Pasteurella phage Pmp81532137.941PasteurellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pasteurella multocida Pm1621Low-qualityGenome-fragment38.280AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OR544138Pasteurella phage Pmp71071436.345PasteurellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pasteurella multocida Past29Low-qualityGenome-fragment14.220HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_1
OR544137Pasteurella phage Pmp63019041.659PasteurellaUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Pasteurella multocida Past34High-qualityHigh-quality96.150AAI-based (high-confidence) IrtavirusIrtavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1
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