INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Create interactive summaries of genome metadata and download the resulting figures.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▼	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
OR553893	Microbacterium phage Zenitsu	40386	62.056	Microbacterium	Group I	Elerivirus	Elerivirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Microbacterium foliorum NRRL B-24224	High-quality	High-quality	99.150	AAI-based (high-confidence)	Elerivirus	Elerivirus eleri	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR553892	Mycobacterium phage Mopey	64625	59.632	Mycobacterium	Group I	Plotvirus	Plotvirus	Dclasvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.000	AAI-based (high-confidence)	Plotvirus	Plotvirus plot	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR553891	Arthrobacter phage CallinAllBarbz	41205	66.249	Arthrobacter	Group I	Baileybluvirus	Baileybluvirus	Unclassified	Casidaviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Arthrobacter sulfureus ATCC 19098	High-quality	High-quality	100.000	AAI-based (high-confidence)	Baileybluvirus	Baileybluvirus callinallbarbz	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_49
OR548257	Clavibacter phage 33	56324	62.488	Clavibacter	Group I	Salvovirus	Salvovirus	Unclassified	Casjensviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Clavibacter michiganensis subsp. michiganensis	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sanovirus	Sanovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR545507	Escherichia phage Sharanji	350079	34.095	Escherichia	Group I	Asteriusvirus	Asteriusvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli K-12 subsr. MG1655	Complete	High-quality	100.000	DTR (high-confidence)	Asteriusvirus	Asteriusvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR545379	Escherichia phage Sekstaphage-1	39368	50.455	Escherichia	Group I	Teetrevirus	Teetrevirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli BW25113	Complete	High-quality	100.000	DTR (high-confidence)	Teetrevirus	Teetrevirus sekstaphage1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR545059	Yersinia phage vB_YpM_476B	31809	51.460	Yersinia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Yersinia pestis EV76-CN	High-quality	High-quality	99.470	AAI-based (high-confidence)	Peduovirus	Peduovirus YPM22	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;immunity orf_31
OR545058	Yersinia phage vB_YpM_476A	31809	51.457	Yersinia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Yersinia pestis EV76-CN	High-quality	High-quality	99.470	AAI-based (high-confidence)	Peduovirus	Peduovirus YPM22	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_30;immunity orf_31
OR545057	Yersinia phage vB_YpM_117	33354	52.473	Yersinia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Yersinia pestis EV76-CN	High-quality	High-quality	100.000	AAI-based (high-confidence)	Peduovirus	Peduovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
OR545056	Yersinia phage vB_YpM_115	33699	52.375	Yersinia	Group I	Peduovirus	Peduovirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Yersinia pestis EV76-CN	High-quality	High-quality	100.000	AAI-based (high-confidence)	Peduovirus	Peduovirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_33