INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▼ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OR962153 | Pseudomonas phage vB_PaeM_SIIA-P1 | 65881 | 55.628 | Pseudomonas | Group I | Pbunavirus | Pbunavirus | Unclassified | Lindbergviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa 7-61-29 | High-quality | High-quality | 99.740 | AAI-based (high-confidence) | Pbunavirus | Pbunavirus LS1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR960973 | Alcaligenes phage CASP1 | 47254 | 46.953 | Alcaligenes | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Alcaligenes faecalis | High-quality | High-quality | 99.640 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OR958571 | Escherichia phage 121/2022-2B | 166713 | 35.372 | Escherichia | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Escherichia coli | High-quality | High-quality | 99.160 | AAI-based (high-confidence) | Tequatrovirus | Tequatrovirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR944503 | Staphylococcus phage vB_SauP_L1 | 17114 | 28.918 | Staphylococcus | Group I | Rosenblumvirus | Rosenblumvirus | Rakietenvirinae | Rountreeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus sp. | High-quality | High-quality | 96.780 | AAI-based (high-confidence) | Rosenblumvirus | Rosenblumvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR941788 | Pseudomonas phage PJNP053 | 73972 | 53.535 | Pseudomonas | Group I | Luzseptimavirus | Luzseptimavirus | Migulavirinae | Schitoviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.800 | AAI-based (high-confidence) | Luzseptimavirus | Luzseptimavirus KPP21 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR941787 | Pseudomonas phage PJNP029 | 92793 | 49.440 | Pseudomonas | Group I | Pakpunavirus | Pakpunavirus | Skurskavirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 99.770 | AAI-based (high-confidence) | Pakpunavirus | Pakpunavirus phipa10 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR941786 | Pseudomonas phage PJNP013 | 43366 | 62.985 | Pseudomonas | Group I | Phikmvvirus | Phikmvvirus | Krylovirinae | Autoscriptoviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Phikmvvirus | Phikmvvirus PJNP013 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR941552 | Microbacterium phage MO526 | 53210 | 71.090 | Microbacterium | Group I | Kozievirus | Kozievirus | Kutznervirinae | Hodgkinviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Microbacterium oxydans | Complete | High-quality | 100.000 | DTR (high-confidence) | Kozievirus | Kozievirus MO526 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR941417 | Escherichia phage RCF | 38501 | 50.983 | Escherichia | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Escherichia coli | Complete | High-quality | 100.000 | DTR (high-confidence) | Teetrevirus | Teetrevirus glastosback | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OR939735 | Salmonella phage ZBSTP8 | 45532 | 45.862 | Salmonella | Group I | Skatevirus | Skatevirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Typhimurium BNCC 108207 | Complete | High-quality | 100.000 | DTR (high-confidence) | Skatevirus | Skatevirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic |