Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
EU676000Mycobacterium phage Adjutor6451159.729MycobacteriumGroup I PlotvirusPlotvirusDclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium sp.High-qualityHigh-quality97.820AAI-based (high-confidence) PlotvirusPlotvirus plotCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU710883Erwinia phage phiEa21-48457643.813ErwiniaGroup I KolesnikvirusKolesnikvirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Erwinia amylovoraHigh-qualityHigh-quality99.680AAI-based (high-confidence) KolesnikvirusKolesnikvirus Ea214Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU716414Pseudomonas phage PB16576454.928PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.560AAI-based (high-confidence) PbunavirusPbunavirus PB1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU717894Xanthomonas phage phiL74408055.640XanthomonasGroup I EisenstarkvirusEisenstarkvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas campestris pv. campestrisHigh-qualityHigh-quality99.540AAI-based (high-confidence) EisenstarkvirusEisenstarkvirus L7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU719189Clostridioides phage phiCD275093029.327ClostridioidesGroup I ColneyvirusColneyvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Clostridioides difficileHigh-qualityHigh-quality100.000AAI-based (high-confidence) ColneyvirusColneyvirus CD27The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_44;antirepressor orf_48
EU734170Yersinia phage Yepe23867747.266YersiniaGroup I BerlinvirusBerlinvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia pestis A1122CompleteHigh-quality100.000DTR (high-confidence) BerlinvirusBerlinvirus berlinCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU734171Escherichia phage BA143981648.777EscherichiaGroup I BerlinvirusBerlinvirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) BerlinvirusBerlinvirus BA14Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU734172Escherichia phage EcoDS13925249.944EscherichiaGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) KayfunavirusKayfunavirus EcoDS1The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
EU734173Klebsiella phage K114118153.248KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella sp. 390CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus K11Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
EU734174Escherichia phage 13a3884148.390EscherichiaGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) TeseptimavirusTeseptimavirus 13aCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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