INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KY705261 | Streptococcus phage P5652 | 33448 | 39.288 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST66565 | High-quality | High-quality | 90.190 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P5651 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KY705262 | Streptococcus phage P7132 | 35843 | 39.040 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64713 | High-quality | High-quality | 96.880 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7132 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_21;antirepressor orf_23 |
| KY705263 | Streptococcus phage P7133 | 33284 | 38.841 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64713 | Medium-quality | Genome-fragment | 89.840 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7133 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_23 |
| KY705264 | Streptococcus phage P7134 | 34019 | 38.943 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64713 | High-quality | High-quality | 92.390 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7134 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_26 |
| KY705265 | Streptococcus phage P7151 | 35025 | 38.789 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64715 | High-quality | High-quality | 94.700 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7151 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KY705266 | Streptococcus phage P7152 | 35663 | 38.903 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64715 | High-quality | High-quality | 96.150 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7152 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_26 |
| KY705267 | Streptococcus phage P7154 | 34507 | 38.792 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64715 | High-quality | High-quality | 93.040 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7154 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KY705268 | Streptococcus phage P7571 | 34907 | 39.388 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST68757 | High-quality | High-quality | 92.020 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P7571 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | cro orf_28 |
| KY705269 | Streptococcus phage P7572 | 33410 | 39.578 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST68757 | Medium-quality | Genome-fragment | 88.080 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P7571 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | cro orf_28 |
| KY705270 | Streptococcus phage P7573 | 37715 | 38.685 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST68757 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7573 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_27;antirepressor orf_29;cro orf_30 |