INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KY705251 | Streptococcus phage P0091 | 35653 | 39.203 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67009 | High-quality | High-quality | 96.100 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P0091 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_24 |
| KY705252 | Streptococcus phage P0092 | 34580 | 38.438 | Streptococcus | Group I | Vansinderenvirus | Vansinderenvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67009 | High-quality | High-quality | 93.980 | AAI-based (high-confidence) | Vansinderenvirus | Vansinderenvirus P0092 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_25;cro orf_26 |
| KY705253 | Streptococcus phage P0093 | 34932 | 38.575 | Streptococcus | Group I | Vansinderenvirus | Vansinderenvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67009 | High-quality | High-quality | 97.450 | AAI-based (high-confidence) | Vansinderenvirus | Vansinderenvirus P0093 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_28 |
| KY705254 | Streptococcus phage P0094 | 33335 | 38.548 | Streptococcus | Group I | Aliceevansviridae | Unclassified | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67009 | High-quality | High-quality | 91.300 | AAI-based (high-confidence) | Vansinderenvirus | Vansinderenvirus P0093 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_26 |
| KY705255 | Streptococcus phage P0095 | 35966 | 38.114 | Streptococcus | Group I | Vansinderenvirus | Vansinderenvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67009 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Vansinderenvirus | Vansinderenvirus P0095 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_27;cro orf_32 |
| KY705256 | Streptococcus phage P3681 | 36168 | 38.412 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67368 | High-quality | High-quality | 98.640 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P3681 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_28 |
| KY705257 | Streptococcus phage P3684 | 35444 | 38.875 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST67368 | High-quality | High-quality | 95.590 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P3684 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_25 |
| KY705258 | Streptococcus phage P4761 | 38139 | 38.957 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST64476 | High-quality | High-quality | 99.380 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P4761 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_32;cro orf_33 |
| KY705259 | Streptococcus phage P5641 | 37235 | 38.848 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST66564 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P5641 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_32;cro orf_33 |
| KY705260 | Streptococcus phage P5651 | 34292 | 39.129 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST66565 | High-quality | High-quality | 92.470 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P5651 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |