Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KY365739Streptomyces phage BabyGotBac5716569.214StreptomycesGroup I WoodruffvirusWoodruffvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces griseus ATCC 10137High-qualityHigh-quality98.090AAI-based (high-confidence) WoodruffvirusWoodruffvirus TP1604Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY368639Bacillus phage vB_BsuM-Goe214614140.265BacillusGroup I OkubovirusOkubovirusSpounavirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Goe2CompleteHigh-quality100.000DTR (high-confidence) OkubovirusOkubovirus SPO1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY368640Bacillus phage vB_BsuM-Goe315643041.927BacillusGroup I GrisebachstrassevirusGrisebachstrassevirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus subtilis Goe3CompleteHigh-quality100.000DTR (high-confidence) GrisebachstrassevirusGrisebachstrassevirus goe3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY379511Pseudoalteromonas phage PHS213580240.626PseudoalteromonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudoalteromonas marina mano4High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KY379853Salmonella phage LPSE14185449.828SalmonellaGroup I JerseyvirusJerseyvirusGuernseyvirinaeSarkviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica serovar EnteritidisHigh-qualityHigh-quality97.590AAI-based (high-confidence) JerseyvirusJerseyvirus LPSE1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY380102Mycobacterium phage CREW5970766.555MycobacteriumGroup I AnayavirusAnayavirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis mc2 115High-qualityHigh-quality97.560AAI-based (high-confidence) AnayavirusAnayavirus adephagiaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_40;immunity orf_42
KY381600Lactobacillus phage P27793739.200LactobacillusGroup I MaenadvirusMaenadvirusTybeckvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactobacillus plantarum IMAU10120High-qualityHigh-quality98.050AAI-based (high-confidence) MaenadvirusMaenadvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_36
KY385380Mycobacterium phage Ashraf6908266.341MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.430AAI-based (high-confidence) PegunavirusPegunavirus olineCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY385381Mycobacterium phage EniyanLRS7853656.889MycobacteriumGroup I WildcatvirusWildcatvirusUnclassifiedVilmaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) WildcatvirusWildcatvirus wildcatCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY385382Mycobacterium phage ImtiyazSitla6908266.347MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.430AAI-based (high-confidence) PegunavirusPegunavirus olineCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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