Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KX965989Aeribacillus phage AP455160638.273AeribacillusGroup I KamchatkavirusKamchatkavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeribacillus pallidusHigh-qualityHigh-quality100.000AAI-based (high-confidence) KamchatkavirusKamchatkavirus AP45Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_11
KX982260Alteromonas phage PB153733345.523AlteromonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Alteromonas gracilis 9a2CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KX987127Thermus phage G20c8129157.634ThermusGroup I OshimavirusOshimavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Thermus thermophilusHigh-qualityHigh-quality98.310AAI-based (high-confidence) OshimavirusOshimavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_5
KX987158Salmonella phage vB_SenS_Sasha5326343.732SalmonellaGroup I SashavirusSashavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar KentuckyHigh-qualityHigh-quality93.820AAI-based (high-confidence) SashavirusSashavirus sashaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
KX987999Bacillus phage BCP1215598539.846BacillusGroup I TsarbombavirusTsarbombavirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus cereusHigh-qualityHigh-quality98.070AAI-based (high-confidence) TsarbombavirusTsarbombavirus BCP78Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY000003Salmonella phage STP0716034244.463SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. enterica serovar TyphimuriumHigh-qualityHigh-quality100.000AAI-based (high-confidence) KuttervirusKuttervirus GG32Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY000079Acinetobacter phage AM249717737.258AcinetobacterGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality99.810AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
KY000080Klebsiella phage KPV1516703439.522KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality98.760AAI-based (high-confidence) JiaodavirusJiaodavirus kppv15Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY000081Klebsiella phage KPV8114264151.347KlebsiellaGroup I DrulisvirusDrulisvirusSlopekvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniaeHigh-qualityHigh-quality97.260AAI-based (high-confidence) DrulisvirusDrulisvirus KPV811Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KY000082Pseudomonas phage PA56618255.489PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus PA5Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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