Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KU189325Streptomyces phage Maih5725669.256StreptomycesGroup I WoodruffvirusWoodruffvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptomyces griseus subsp. griseus ATCC 10137High-qualityHigh-quality98.260AAI-based (high-confidence) WoodruffvirusWoodruffvirus TP1604Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU194205Escherichia phage JMPW25029845.376EscherichiaGroup I TunavirusTunavirusTunavirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli JM110High-qualityHigh-quality100.000AAI-based (high-confidence) TunavirusTunavirus JMPW2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU194206Escherichia phage JMPW14962845.559EscherichiaGroup I TunavirusTunavirusTunavirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli JM109High-qualityHigh-quality99.090AAI-based (high-confidence) TunavirusTunavirus JMPW1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_58
KU197013Xanthomonas phage XAJ244486258.205XanthomonasGroup I PradovirusPradovirusGujervirinaeAutonotataviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas arboricola pv. juglandisCompleteHigh-quality100.000DTR (high-confidence) PradovirusPradovirus XAJ24Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU197014Xanthomonas phage XAJ24924147.434XanthomonasGroup I XajduovirusXajduovirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas arboricola pv. juglandisHigh-qualityHigh-quality100.000AAI-based (high-confidence) XajduovirusXajduovirus XAJ2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU198331Pseudomonas phage NP36606355.412PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PA14High-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus SNCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KU199707Pseudomonas phage JBD16C3643663.811PseudomonasGroup I CasadabanvirusCasadabanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PA14High-qualityHigh-quality95.660AAI-based (high-confidence) CasadabanvirusCasadabanvirus MP22Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1;integrase orf_5
KU199708Pseudomonas phage JBD693693863.931PseudomonasGroup I CasadabanvirusCasadabanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PA14High-qualityHigh-quality97.050AAI-based (high-confidence) CasadabanvirusCasadabanvirus JBD69Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1
KU199709Pseudomonas phage JBD933662964.293PseudomonasGroup I CasadabanvirusCasadabanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PA14High-qualityHigh-quality96.210AAI-based (high-confidence) CasadabanvirusCasadabanvirus FHA0480Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1
KU199710Pseudomonas phage JBD444903358.493PseudomonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosa PA14High-qualityHigh-quality99.920AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancetemperateintegrase orf_36;integrase orf_44
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