Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KT361656Paenibacillus phage Vadim4565343.653PaenibacillusGroup I VegasvirusVegasvirusGochnauervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae NRRL 2605High-qualityHigh-quality100.000AAI-based (high-confidence) VegasvirusVegasvirus vegasCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;antirepressor orf_37
KT361657Paenibacillus phage Diane4565343.649PaenibacillusGroup I VegasvirusVegasvirusGochnauervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Paenibacillus larvae NRRL 2605High-qualityHigh-quality100.000AAI-based (high-confidence) VegasvirusVegasvirus vegasCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;antirepressor orf_37
KT361920Mycobacterium phage Slarp5725667.965MycobacteriumGroup I FionnbharthvirusFionnbharthvirusWeiservirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.450AAI-based (high-confidence) FionnbharthvirusFionnbharthvirus fionnbharthCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_44;immunity orf_46;cro orf_47
KT363731Mycobacterium phage TheloniousMonk5205563.648MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_38;immunity orf_71
KT363872Citrobacter phage Mordin8959638.808CitrobacterGroup I MooglevirusMooglevirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Citrobacter freundiiHigh-qualityHigh-quality100.000AAI-based (high-confidence) MooglevirusMooglevirus mordinThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
KT364588Mycobacterium phage Hetaeria6840566.451MycobacteriumGroup I PegunavirusPegunavirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.460AAI-based (high-confidence) PegunavirusPegunavirus Pg1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT365397Mycobacterium phage Maverick5137263.943MycobacteriumGroup I BackyardiganvirusBackyardiganvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) BackyardiganvirusBackyardiganvirus peachesCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;immunity orf_63
KT365398Mycobacterium phage DTDevon15675464.636MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.260AAI-based (high-confidence) BixzunavirusBixzunavirus Bxz1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT365399Mycobacterium phage Annihilator4189366.598MycobacteriumGroup I LiefievirusLiefievirusGclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.360AAI-based (high-confidence) LiefievirusLiefievirus haloCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_32;immunity orf_33
KT365400Mycobacterium phage ErnieJ15324364.733MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality96.060AAI-based (high-confidence) BixzunavirusBixzunavirus quasimodoCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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