Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KT232076Escherichia phage Lambda4920549.747EscherichiaGroup I LambdavirusLambdavirusJacobvirinaeZimmerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli K-12 CV601High-qualityHigh-quality100.000AAI-based (high-confidence) LambdavirusLambdavirus lambdaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_43;cro orf_44;integrase orf_61
KT239446Klebsiella phage JD1816631339.599KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) JiaodavirusJiaodavirus jd18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT240186Dickeya phage BF25/124387252.186DickeyaGroup I StompvirusStompvirusCorkvirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Dickeya sp. B16High-qualityHigh-quality99.460AAI-based (high-confidence) StompvirusStompvirus BF2512Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT246485Mycobacterium phage OBUpride5379067.505MycobacteriumGroup I GilesvirusGilesvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.050AAI-based (high-confidence) GilesvirusGilesvirus gilesCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_29
KT246486Mycobacterium phage Chadwick4942159.786MycobacteriumGroup I BenedictvirusBenedictvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.400AAI-based (high-confidence) BenedictvirusBenedictvirus chadwickCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_26;immunity orf_62
KT253150Rhodobacter phage RcSaxon3608165.442RhodobacterGroup I CronusvirusCronusvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhodobacter capsulatus YW1High-qualityHigh-quality100.000AAI-based (high-confidence) CronusvirusCronusvirus cronusCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT254130Pbunalikevirus phiVader6576254.925UnspecifiedGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Chyrseobacterium sp.High-qualityHigh-quality99.560AAI-based (high-confidence) PbunavirusPbunavirus PB1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT254131Pbunalikevirus phiMoody6590854.902UnspecifiedGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Chyrseobacterium sp.High-qualityHigh-quality99.780AAI-based (high-confidence) PbunavirusPbunavirus PB1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT254132Pbunalikevirus phiHabibi6576354.918UnspecifiedGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Chyrseobacterium sp.High-qualityHigh-quality99.560AAI-based (high-confidence) PbunavirusPbunavirus PB1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KT254133Pbunalikevirus phiFenriz6576054.938UnspecifiedGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Chyrseobacterium sp.High-qualityHigh-quality99.560AAI-based (high-confidence) PbunavirusPbunavirus PB1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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