Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
KP793130Lactococcus phage 936 group phage Phi1553215034.936LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SkunavirusSkunavirus sv155Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP793131Lactococcus phage 936 group phage PhiE11273227034.620LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SkunavirusSkunavirus E1127Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP793132Lactococcus phage 936 group phage PhiM11273268234.790LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SkunavirusSkunavirus M1127Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP793133Lactococcus phage 936 group phage PhiLj2898335.138LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactisHigh-qualityHigh-quality95.590AAI-based (high-confidence) SkunavirusSkunavirus LjCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP793134Lactococcus phage 936 group phage PhiS01393011635.197LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactisHigh-qualityHigh-quality99.300AAI-based (high-confidence) SkunavirusSkunavirus S0139Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP793135Lactococcus phage 936 group phage Phi.163156134.834LactococcusGroup I SkunavirusSkunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Lactococcus lactisHigh-qualityHigh-quality100.000AAI-based (high-confidence) SkunavirusSkunavirus sv91127Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP797973Salmonella phage Det715749844.598SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica serovar TyphimuriumHigh-qualityHigh-quality99.640AAI-based (high-confidence) KuttervirusKuttervirus Det7Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KP836355Marinitoga camini virus 15341228.065MarinitogaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Marinitoga camini 1197High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_44;antirepressor orf_62
KP836356Marinitoga camini virus 25030728.732MarinitogaGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Marinitoga camini 1155High-qualityHigh-quality97.840AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperatecro orf_6
KP861229Acinetobacter phage YMC11/12/R23154484637.600AcinetobacterGroup I ObolenskvirusObolenskvirusUnclassifiedHirszfeldviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter sp.High-qualityHigh-quality99.840AAI-based (high-confidence) ObolenskvirusObolenskvirus AbC62The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
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