Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OP651044Staphylococcus phage vb_SaH_Safa14874030.251StaphylococcusGroup I KayvirusKayvirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureusCompleteHigh-quality100.000DTR (high-confidence) KayvirusKayvirus G1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP654737Campylobacter phage vB_CjeM_WX117797827.566CampylobacterGroup I ConnertonviridaeUnclassifiedUnclassifiedConnertonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Campylobacter jejuniHigh-qualityHigh-quality99.660AAI-based (high-confidence) FirehammervirusFirehammervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP661216Staphylococcus phage phiSa2wa-st80.24516433.259StaphylococcusGroup I TriavirusTriavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus sub sp. aureus 15062 ST80-MRSA-IVcHigh-qualityHigh-quality97.260AAI-based (high-confidence) TriavirusTriavirus JS02The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;integrase orf_2;cro orf_8;integrase orf_31
OP661217Staphylococcus phage phiSa2wa-st80.44516433.254StaphylococcusGroup I TriavirusTriavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus aureus sub sp. aureus 17006 ST80-MRSA-IVcHigh-qualityHigh-quality97.260AAI-based (high-confidence) TriavirusTriavirus JS02The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_1;integrase orf_2;cro orf_8;integrase orf_31
OP662523Streptococcus phage YS7716551139.003StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisCompleteHigh-quality100.000Provirus (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_59
OP662524Streptococcus phage YS3877131138.948StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_64;antirepressor orf_75
OP662525Streptococcus phage YS2256213139.692StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_51;antirepressor orf_61
OP662526Streptococcus phage YS2626213139.692StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_51;antirepressor orf_61
OP662527Streptococcus phage YS2556213139.692StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_51;antirepressor orf_61
OP662528Streptococcus phage YS2146213139.689StreptococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Streptococcus suisHigh-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_51;antirepressor orf_61
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