INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KF626667 | Xylella phage Prado | 43940 | 63.022 | Xylella | Group I | Pradovirus | Pradovirus | Gujervirinae | Autonotataviridae | Autographivirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xylella fastidiosa | Complete | High-quality | 100.000 | DTR (high-confidence) | Pradovirus | Pradovirus prado | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF626668 | Xylella phage Salvo | 55601 | 63.040 | Xylella | Group I | Salvovirus | Salvovirus | Unclassified | Casjensviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Xylella fastidiosa | High-quality | High-quality | 99.690 | AAI-based (high-confidence) | Salvovirus | Salvovirus salvo | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669647 | Bacillus phage BigBertha | 165238 | 37.773 | Bacillus | Group I | Bequatrovirus | Bequatrovirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus thuringiensis subsp. Kurstaki | Complete | High-quality | 100.000 | DTR (high-confidence) | Bequatrovirus | Bequatrovirus bigbertha | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669648 | Bacillus phage Blastoid | 50354 | 42.233 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL-8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus blastoid | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669649 | Bacillus phage CampHawk | 146193 | 40.195 | Bacillus | Group I | Okubovirus | Okubovirus | Spounavirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus subtilis | Complete | High-quality | 100.000 | DTR (high-confidence) | Okubovirus | Okubovirus camphawk | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669650 | Clavibacter phage CN1A | 56789 | 62.088 | Clavibacter | Group I | Cinunavirus | Cinunavirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clavibacter michiganensis CN18-4 | Complete | High-quality | 100.000 | DTR (high-confidence) | Cinunavirus | Cinunavirus CN1A | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669651 | Bacillus phage Glittering | 49246 | 42.054 | Bacillus | Group I | Andromedavirus | Andromedavirus | Unclassified | Ehrlichviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus pumilus BL-8 | Complete | High-quality | 100.000 | DTR (high-confidence) | Andromedavirus | Andromedavirus glittering | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669652 | Bacillus phage Grass | 156648 | 42.247 | Bacillus | Group I | Nitunavirus | Nitunavirus | Bastillevirinae | Herelleviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus subtilis | Complete | High-quality | 100.000 | DTR (high-confidence) | Nitunavirus | Nitunavirus grass | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669653 | Salmonella phage Marshall | 156338 | 45.587 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enteritidis | High-quality | High-quality | 98.930 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus marshall | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KF669654 | Salmonella phage Maynard | 154701 | 45.552 | Salmonella | Group I | Kuttervirus | Kuttervirus | Cvivirinae | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella typhimurium | High-quality | High-quality | 97.890 | AAI-based (high-confidence) | Kuttervirus | Kuttervirus maynard | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |