Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
JX912252Escherichia phage ADB-25055245.555EscherichiaGroup I TunavirusTunavirusTunavirinaeDrexlerviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) TunavirusTunavirus ADB2Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX944686Sulfolobales Mexican rod-shaped virus 12743146.597UnspecifiedGroup I MexirudivirusMexirudivirusUnclassifiedRudiviridaeLigamenviralesTokiviricetesTaleaviricotaZilligviraeAdnaviria UnspecifiedCompleteHigh-quality100.000ITR (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
JX976549Acinetobacter phage vB_AbaM-IME-AB24366537.497AcinetobacterGroup I ObolenskvirusObolenskvirusUnclassifiedHirszfeldviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Acinetobacter baumanniiHigh-qualityHigh-quality97.300AAI-based (high-confidence) ObolenskvirusObolenskvirus AB2The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperatecro orf_6
JX997978Pseudomonas phage MPK64295762.279PseudomonasGroup I PhikmvvirusPhikmvvirusKrylovirinaeAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas aeruginosaHigh-qualityHigh-quality99.730AAI-based (high-confidence) PhikmvvirusPhikmvvirus MPK6Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC012913Staphylococcus phage Team114090330.327StaphylococcusGroup I KayvirusKayvirusTwortvirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Staphylococcus xylosus SMQ121High-qualityHigh-quality99.510AAI-based (high-confidence) KayvirusKayvirus G1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC013021Leuconostoc phage P7932676936.628LeuconostocGroup I LimdunavirusLimdunavirusMccleskeyvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leuconostoc pseudomesenteroides BM2High-qualityHigh-quality99.730AAI-based (high-confidence) LimdunavirusLimdunavirus P793Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC013022Leuconostoc phage LN032675236.779LeuconostocGroup I LimdunavirusLimdunavirusMccleskeyvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leuconostoc pseudomesenteroides LN02High-qualityHigh-quality99.490AAI-based (high-confidence) LimdunavirusLimdunavirus LN03Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC013023Leuconostoc phage LN042586536.598LeuconostocGroup I LimdunavirusLimdunavirusMccleskeyvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leuconostoc pseudomesenteroides LN02High-qualityHigh-quality96.310AAI-based (high-confidence) LimdunavirusLimdunavirus LN04Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC013024Leuconostoc phage phiLN6B2574036.465LeuconostocGroup I LimdunavirusLimdunavirusMccleskeyvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leuconostoc pseudomesenteroides LN02High-qualityHigh-quality95.900AAI-based (high-confidence) LimdunavirusLimdunavirus Lmd1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
KC013025Leuconostoc phage phiLN122819336.637LeuconostocGroup I LimdunavirusLimdunavirusMccleskeyvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leuconostoc pseudomesenteroides LN02High-qualityHigh-quality100.000AAI-based (high-confidence) LimdunavirusLimdunavirus LN12Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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