Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
JX434031Pseudomonas phage JBD243709564.240PseudomonasGroup I CasadabanvirusCasadabanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality97.500AAI-based (high-confidence) CasadabanvirusCasadabanvirus JBD24Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1
JX434032Pseudomonas phage JBD303694764.276PseudomonasGroup I CasadabanvirusCasadabanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality97.150AAI-based (high-confidence) CasadabanvirusCasadabanvirus JBD30Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1;integrase orf_6
JX434033Pseudomonas phage JBD88a3642963.985PseudomonasGroup I CasadabanvirusCasadabanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality95.560AAI-based (high-confidence) CasadabanvirusCasadabanvirus MP22Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_1
JX442241Listeria phage P706717036.457ListeriaGroup I HomburgvirusHomburgvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Listeria sp.High-qualityHigh-quality100.000AAI-based (high-confidence) HomburgvirusHomburgvirus P70Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX483873Rhizobium phage RHEph014344459.177RhizobiumGroup I PaadamvirusPaadamvirusUnclassifiedUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli Brasil5CompleteHigh-quality100.000DTR (high-confidence) PaadamvirusPaadamvirus RHEph01Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_6
JX483874Rhizobium phage RHEph024648649.350RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli Brasil5CompleteHigh-quality100.000DTR (high-confidence) CuernavacavirusCuernavacavirus RHEph02Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX483875Rhizobium phage RHEph034591249.342RhizobiumGroup I CuernavacavirusCuernavacavirusDunnvirinaeUnclassifiedAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli Brasil5High-qualityHigh-quality98.960AAI-based (high-confidence) CuernavacavirusCuernavacavirus RHEph02Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX483876Rhizobium phage RHEph045301856.422RhizobiumGroup I KleczkowskavirusKleczkowskavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli GR56High-qualityHigh-quality97.910AAI-based (high-confidence) KleczkowskavirusKleczkowskavirus RHEph4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX483877Rhizobium phage RHEph055042656.443RhizobiumGroup I KleczkowskavirusKleczkowskavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli GR56High-qualityHigh-quality93.120AAI-based (high-confidence) KleczkowskavirusKleczkowskavirus RHEph4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
JX483878Rhizobium phage RHEph065372156.429RhizobiumGroup I KleczkowskavirusKleczkowskavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Rhizobium etli GR56High-qualityHigh-quality99.220AAI-based (high-confidence) KleczkowskavirusKleczkowskavirus RHEph4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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