INPHARED2 - BMCPR

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
JQ740814	Lactococcus phage ASCC544	32275	34.538	Lactococcus	Group I	Skunavirus	Skunavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Lactococcus lactis	High-quality	High-quality	100.000	AAI-based (high-confidence)	Skunavirus	Skunavirus ASCC273	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
JQ762257	Pseudomonas phage MP42	36847	64.198	Pseudomonas	Group I	Casadabanvirus	Casadabanvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas aeruginosa PA14	High-quality	High-quality	96.870	AAI-based (high-confidence)	Casadabanvirus	Casadabanvirus MP42	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_1;integrase orf_6
JQ768459	Pseudomonas phage Lu11	280538	50.883	Pseudomonas	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pseudomonas putida var. Manila	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_127
JQ779023	Staphylococcus phage SMSAP5	45552	33.415	Staphylococcus	Group I	Triavirus	Triavirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	98.100	AAI-based (high-confidence)	Triavirus	Triavirus SAP11	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_7;integrase orf_41
JQ779024	Staphylococcus phage TEM123	43786	34.036	Staphylococcus	Group I	Dubowvirus	Dubowvirus	Azeredovirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Staphylococcus aureus	High-quality	High-quality	100.000	AAI-based (high-confidence)	Dubowvirus	Dubowvirus new_name	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	antirepressor orf_10;cro orf_11;cro orf_12;integrase orf_16;integrase orf_49
JQ780163	Vibrio phage VP3	39481	42.618	Vibrio	Group I	Chatterjeevirus	Chatterjeevirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio cholerae	High-quality	High-quality	100.000	AAI-based (high-confidence)	Chatterjeevirus	Chatterjeevirus VP4	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
JQ780327	Cronobacter phage phiES15	39974	53.542	Cronobacter	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	UV-induced Cronobacter sakazakii ES15	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_3
JQ797329	Listeria phage vB_LmoM_AG20	133057	35.933	Listeria	Group I	Pecentumvirus	Pecentumvirus	Jasinskavirinae	Herelleviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Listeria monocytogenes CRIFS culture collection code: C519	High-quality	High-quality	96.390	AAI-based (high-confidence)	Pecentumvirus	Pecentumvirus AG20	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
JQ801337	Vibrio phage VvAW1	38682	49.113	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio vulnificus	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	cro orf_33
JQ806763	Salmonella phage vB_SemP_Emek	39783	47.651	Salmonella	Group I	Lederbergvirus	Lederbergvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella serovar Haardt	High-quality	High-quality	97.060	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	antirepressor orf_23;integrase orf_25;integrase orf_40;cro orf_44