INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NC_030944 | Gordonia phage Demosthenes | 74073 | 59.255 | Gordonia | Group I | Demosthenesvirus | Demosthenesvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | Complete | High-quality | 100.000 | DTR (high-confidence) | lytic | ||||
| NC_030945 | Bacillus phage BalMu-1 | 39873 | 42.761 | Bacillus | Group I | Fenglinvirus | Fenglinvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacillus alcalophilus CGMCC 1.3604 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_7 | |||
| NC_030946 | Streptococcus phage phiARI0923 | 33477 | 38.952 | Streptococcus | Group I | Adrianbuildvirus | Adrianbuildvirus | Mcshanvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus pneumoniae 10B00617 | High-quality | High-quality | 99.790 | AAI-based (high-confidence) | temperate | integrase orf_23;cro orf_25;antirepressor orf_34;cro orf_41;integrase orf_44 | |||
| NC_030947 | Clostridium phage phiCT19406B | 38243 | 29.048 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium tetani ATCC 19406 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;antirepressor orf_6;cro orf_67 | |||
| NC_030948 | Ralstonia phage RSP15 | 167619 | 44.702 | Ralstonia | Group I | Ackermannviridae | Unclassified | Unclassified | Ackermannviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_030949 | Clostridium phage phiCTC2A | 47020 | 28.405 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium tetani C2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;antirepressor orf_7 | |||
| NC_030950 | Clostridium phage phiCT19406A | 47020 | 28.396 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium tetani ATCC 19406 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;antirepressor orf_7 | |||
| NC_030951 | Clostridium phage phiCTC2B | 38243 | 29.056 | Clostridium | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Clostridium tetani C2 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | temperate | integrase orf_1;cro orf_4;antirepressor orf_6;cro orf_67 | |||
| NC_030953 | Shigella phage SHFML-11 | 170650 | 35.238 | Shigella | Group I | Tequatrovirus | Tequatrovirus | Tevenvirinae | Straboviridae | Pantevenvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Shigella sonnei | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | lytic | ||||
| NC_031001 | Gordonia phage Terapin | 66611 | 59.552 | Gordonia | Group I | Terapinvirus | Terapinvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 99.660 | AAI-based (high-confidence) | lytic |