INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
MK373798	Escherichia phage vB_EcoS_G29-2	51739	44.017	Escherichia	Group I	Hanrivervirus	Hanrivervirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Hanrivervirus	Hanrivervirus G292	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK373799	Escherichia phage vB_EcoS_EASG3	120715	39.037	Escherichia	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	Complete	High-quality	100.000	DTR (high-confidence)	Tequintavirus	Tequintavirus HASG4	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
MK376954	Gordonia phage WhoseManz	64214	66.051	Gordonia	Group I	Sukkupivirus	Sukkupivirus	Emilbogenvirinae	Zierdtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	96.340	AAI-based (high-confidence)	Sukkupivirus	Sukkupivirus marietta	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK376955	Mycobacterium phage KiSi	62558	68.749	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Anayavirus	Anayavirus kisi	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_44;immunity orf_46
MK376956	Gordonia phage WilliamBoone	92688	61.939	Gordonia	Group I	Smoothievirus	Smoothievirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	99.470	AAI-based (high-confidence)	Smoothievirus	Smoothievirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_72
MK376958	Gordonia phage Brylie	49870	67.303	Gordonia	Group I	Betterkatzvirus	Betterkatzvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	98.370	AAI-based (high-confidence)	Betterkatzvirus	Betterkatzvirus betterkatz	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_37
MK376959	Gordonia phage Aphelion	93276	61.930	Gordonia	Group I	Smoothievirus	Smoothievirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	99.940	AAI-based (high-confidence)	Smoothievirus	Smoothievirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_73;immunity orf_75
MK376960	Gordonia phage BiPauneto	66935	66.222	Gordonia	Group I	Sukkupivirus	Sukkupivirus	Emilbogenvirinae	Zierdtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sukkupivirus	Sukkupivirus sukkupi	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK376961	Gordonia phage Asapag	55119	63.071	Gordonia	Group I	Getalongvirus	Getalongvirus	Langleyhallvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Getalongvirus	Getalongvirus asapag	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_45;antirepressor orf_54
MK376962	Gordonia phage NosilaM	67662	65.579	Gordonia	Group I	Kablunavirus	Kablunavirus	Emilbogenvirinae	Zierdtviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Gordonia terrae 3612	High-quality	High-quality	100.000	AAI-based (high-confidence)	Kablunavirus	Kablunavirus nosilaM	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic