Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MK359350Mycobacterium phage Nidhogg15634264.695MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.000AAI-based (high-confidence) BixzunavirusBixzunavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK359352Mycobacterium phage JewelBug5034161.602MycobacteriumGroup I GladiatorvirusGladiatorvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality95.590AAI-based (high-confidence) GladiatorvirusGladiatorvirus jewelbugCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateparA orf_32;antirepressor orf_63
MK359353Mycobacterium phage BadAgartude15565864.672MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.560AAI-based (high-confidence) BixzunavirusBixzunavirus charlieBCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateimmunity orf_46
MK359354Mycobacterium phage PinkPlastic4959363.648MycobacteriumGroup I FromanvirusFromanvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality95.540AAI-based (high-confidence) FromanvirusFromanvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_35;immunity orf_69
MK359355Mycobacterium phage Sprinklers15606064.660MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.810AAI-based (high-confidence) BixzunavirusBixzunavirus charlieBCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK359356Mycobacterium phage Nebs5141263.831MycobacteriumGroup I BackyardiganvirusBackyardiganvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality100.000AAI-based (high-confidence) BackyardiganvirusBackyardiganvirus bellusterraCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_31;immunity orf_64
MK359357Mycobacterium phage RomaT6923967.489MycobacteriumGroup I PipefishvirusPipefishvirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.200AAI-based (high-confidence) PipefishvirusPipefishvirus athenaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK359358Mycobacterium phage Essence15570064.640MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.580AAI-based (high-confidence) BixzunavirusBixzunavirus quasimodoCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK359359Mycobacterium phage Colt15850864.698MycobacteriumGroup I BixzunavirusBixzunavirusCeeclamvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.310AAI-based (high-confidence) BixzunavirusBixzunavirus cane17Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MK359360Mycobacterium phage Hexamo5235961.414MycobacteriumGroup I GladiatorvirusGladiatorvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality99.800AAI-based (high-confidence) GladiatorvirusGladiatorvirus CloudWang3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateparA orf_31;immunity orf_68
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