INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MK279895 | Mycobacterium phage Zaider | 68983 | 66.569 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.290 | AAI-based (high-confidence) | Pegunavirus | Pegunavirus Pg1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK279896 | Arthrobacter phage Zorro | 43562 | 61.072 | Arthrobacter | Group I | Korravirus | Korravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter sp. ATCC 21022 | High-quality | High-quality | 99.580 | AAI-based (high-confidence) | Korravirus | Korravirus korra | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK279897 | Mycobacterium phage Bishoperium | 68865 | 66.495 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.120 | AAI-based (high-confidence) | Pegunavirus | Pegunavirus Pg1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK279898 | Mycobacterium phage Cici | 51287 | 63.706 | Mycobacterium | Group I | Backyardiganvirus | Backyardiganvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Backyardiganvirus | Backyardiganvirus backyardigan | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_31;immunity orf_63 |
| MK279900 | Gordonia phage Nina | 46702 | 59.533 | Gordonia | Group I | Emalynvirus | Emalynvirus | Ceeteevirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae NRRL B-16283 SEA | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Emalynvirus | Emalynvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK279901 | Arthrobacter phage Potatoes | 43661 | 60.972 | Arthrobacter | Group I | Korravirus | Korravirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Arthrobacter sp. ATCC 21022 | High-quality | High-quality | 99.800 | AAI-based (high-confidence) | Korravirus | Korravirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK279902 | Mycobacterium phage Citius | 51393 | 63.886 | Mycobacterium | Group I | Backyardiganvirus | Backyardiganvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Backyardiganvirus | Backyardiganvirus peaches | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_31;immunity orf_63 |
| MK279903 | Mycobacterium phage Zetzy | 48229 | 64.028 | Mycobacterium | Group I | Microwolfvirus | Microwolfvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 96.810 | AAI-based (high-confidence) | Microwolfvirus | Microwolfvirus zetzy | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_31 |
| MK279904 | Mycobacterium phage RedMaple | 68985 | 66.427 | Mycobacterium | Group I | Pegunavirus | Pegunavirus | Bclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycobacterium smegmatis str. MC2 155 | High-quality | High-quality | 99.290 | AAI-based (high-confidence) | Pegunavirus | Pegunavirus Pg1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| MK279906 | Gordonia phage Kenna | 53215 | 62.975 | Gordonia | Group I | Getalongvirus | Getalongvirus | Langleyhallvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Gordonia terrae 3612 | High-quality | High-quality | 97.400 | AAI-based (high-confidence) | Getalongvirus | Getalongvirus kenna | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_49;antirepressor orf_56 |