INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37387 matching reference genomes out of 37387. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle
MK095204	Pectobacterium phage Koot_B1	43402	49.018	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	98.470	AAI-based (high-confidence)	Phimunavirus	Phimunavirus koot	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095205	Pectobacterium phage Nobby_B1	42836	49.003	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	97.180	AAI-based (high-confidence)	Phimunavirus	Phimunavirus nobby	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095206	Pectobacterium phage Nobby_B2	42837	49.016	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	97.190	AAI-based (high-confidence)	Phimunavirus	Phimunavirus nobby	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095207	Pectobacterium phage Nobby_B3	42818	48.993	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	97.140	AAI-based (high-confidence)	Phimunavirus	Phimunavirus nobby	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095208	Pectobacterium phage Nobby_B4	42830	48.998	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	97.170	AAI-based (high-confidence)	Phimunavirus	Phimunavirus nobby	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095209	Pectobacterium phage Phoria	43825	48.634	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	99.420	AAI-based (high-confidence)	Phimunavirus	Phimunavirus phoria	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095210	Pectobacterium phage Zenivior	43724	48.998	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	99.200	AAI-based (high-confidence)	Phimunavirus	Phimunavirus zenivior	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095211	Pectobacterium phage Zenivior_B1	43724	49.001	Pectobacterium	Group I	Phimunavirus	Phimunavirus	Corkvirinae	Autoscriptoviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pectobacterium atrosepticum DSM18077	High-quality	High-quality	99.190	AAI-based (high-confidence)	Phimunavirus	Phimunavirus zenivior	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
MK095605	Pantoea phage vB_PagS_MED16	46103	55.111	Pantoea	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pantoea agglomerans	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
MK095606	Pantoea phage vB_PagS_AAS23	51170	47.645	Pantoea	Group I	Sauletekiovirus	Sauletekiovirus	Unclassified	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Pantoea agglomerans	High-quality	High-quality	100.000	AAI-based (high-confidence)	Sauletekiovirus	Sauletekiovirus AAS23	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic