Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MG820641Propionibacterium phage pa6152930754.414PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnes 06-0893High-qualityHigh-quality99.480AAI-based (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG820642Propionibacterium phage pa282973354.138PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnes 02-A-018High-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG820643Propionibacterium phage pa352949154.271PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnes 05-A-026High-qualityHigh-quality100.000AAI-based (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG820644Propionibacterium phage pa332913554.412PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnes 05-A-026High-qualityHigh-quality98.900AAI-based (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG820645Propionibacterium phage pa3-SS32913754.412PropionibacteriumGroup I PahexavirusPahexavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cutibacterium acnes 05-A-026High-qualityHigh-quality98.910AAI-based (high-confidence) PahexavirusPahexavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG832642Escherichia phage HZ2R83948248.615EscherichiaGroup I TeseptimavirusTeseptimavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliCompleteHigh-quality100.000DTR (high-confidence) TeseptimavirusTeseptimavirus HZ2R8Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG835450Pontimonas phage phiPsal13106953.278PontimonasGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pontimonas salivibrio CL-TW6High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
MG835568Klebsiella phage SH-Kp 1524104094552.346KlebsiellaGroup I PrzondovirusPrzondovirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae 152410CompleteHigh-quality100.000DTR (high-confidence) PrzondovirusPrzondovirus SHKp152410Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MG835858Klebsiella phage KPN N985921456.289KlebsiellaGroup I YonseivirusYonseivirusUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae YMC15/11/N98High-qualityHigh-quality100.000AAI-based (high-confidence) YonseivirusYonseivirus N137Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_77
MG839014Mycobacterium phage RagingRooster6867067.578MycobacteriumGroup I PipefishvirusPipefishvirusBclasvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality98.380AAI-based (high-confidence) PipefishvirusPipefishvirus athenaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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