Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
MF476924Klebsiella phage YMC15/11/N53_KPN_BP5910056.301KlebsiellaGroup I YonseivirusYonseivirusUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae YMC15/11/N53High-qualityHigh-quality100.000AAI-based (high-confidence) YonseivirusYonseivirus N137Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_77
MF476925Klebsiella phage YMC16/01/N133_KPN_BP5838758.880KlebsiellaGroup I SeodaemunguvirusSeodaemunguvirusUnclassifiedCasjensviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Klebsiella pneumoniae YMC16/01/N133High-qualityHigh-quality100.000AAI-based (high-confidence) SeodaemunguvirusSeodaemunguvirus YMC16-01N133Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_12
MF477236Nocardia phage NTR16527568.167NocardiaGroup I NitrunavirusNitrunavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Nocardia transvalensisHigh-qualityHigh-quality100.000AAI-based (high-confidence) NitrunavirusNitrunavirus NTR1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MF479730Aeromonas phage AS-gz16242241.127AeromonasGroup I TulanevirusTulanevirusUnclassifiedStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas salmonicida subsp. salmonicidaHigh-qualityHigh-quality95.990AAI-based (high-confidence) TulanevirusTulanevirus asgzCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MF490236Pseudomonas phage vB_PaeP_PYO27269754.843PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) LitunavirusLitunavirus Ab09Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MF490237Pseudomonas phage vB_PaeP_E2206287463.832PseudomonasGroup I HollowayvirusHollowayvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) HollowayvirusHollowayvirus E220Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_12
MF490238Pseudomonas phage vB_PaeP_DEV7269754.862PseudomonasGroup I LitunavirusLitunavirusMigulavirinaeSchitoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) LitunavirusLitunavirus Ab09Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MF490239Pseudomonas phage vB_PaeS_S2186168064.450PseudomonasGroup I YuavirusYuavirusRabinowitzvirinaeMesyanzhinovviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) YuavirusYuavirus LKO4Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MF490240Pseudomonas phage vB_PaeM_E2176629155.647PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus E217Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
MF490241Pseudomonas phage vB_PaeM_E2156678955.629PseudomonasGroup I PbunavirusPbunavirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) PbunavirusPbunavirus E215Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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