Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
LR797314uncultured Caudovirales phage3630642.059UnspecifiedGroup I MaltschvirusMaltschvirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.660AAI-based (medium-confidence) MaltschvirusMaltschvirus maltschCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_35
LR797923Bacteriophage APSE-73753143.964UnspecifiedGroup I SendosyvirusSendosyvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.120AAI-based (high-confidence) SendosyvirusSendosyvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_1;antirepressor orf_4
LR800396Salmonella phage Se_AO115754344.630SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.670AAI-based (high-confidence) KuttervirusKuttervirus SH19Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR811967Salmonella phage Se_EM115931244.488SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) KuttervirusKuttervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR811968Salmonella phage Se_EM415781044.743SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.840AAI-based (high-confidence) KuttervirusKuttervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR811969Salmonella phage Se_EM315709944.546SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality99.390AAI-based (high-confidence) KuttervirusKuttervirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR813619Aeromonas phage PVN025166852.452AeromonasGroup I PahsextavirusPahsextavirusNefertitivirinaeChaseviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) PhayathaivirusPhayathaivirus pAh62TGThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
LR865361Escherichia phage Paula14655437.476EscherichiaGroup I JustusliebigvirusJustusliebigvirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) JustusliebigvirusJustusliebigvirus aliaCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR877331Klebsiella phage vB_KpnM_311F16671039.595KlebsiellaGroup I JiaodavirusJiaodavirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) JiaodavirusJiaodavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR877332Shigella phage vB_SsoM_JK0816920735.377ShigellaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality100.000AAI-based (high-confidence) TequatrovirusTequatrovirus ecombl75Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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