Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
LR535902Salmonella phage SPFM424019748.618SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_60
LR535903Salmonella phage SPFM524019448.613SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.340HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR535904Salmonella phage SPFM724019748.621SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.140HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR535905Salmonella phage SPFM624019848.617SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment87.840HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR535906Salmonella phage SPFM824019748.619SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.700HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR535907Salmonella phage SPFM924019748.621SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.520HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
LR535908Salmonella phage SPFM1024019748.617SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.370HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperatecro orf_193
LR535909Salmonella phage SPFM1124019748.620SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedCompleteHigh-quality100.000DTR (high-confidence) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_183
LR535910Salmonella phage SPFM1324140548.573SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedHigh-qualityHigh-quality98.240AAI-based (high-confidence) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateantirepressor orf_28
LR535911Salmonella phage SPFM1224019748.621SalmonellaGroup I SeoulvirusSeoulvirusUnclassifiedChimalliviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria UnspecifiedMedium-qualityGenome-fragment88.840HMM-based (lower-bound) SeoulvirusSeoulvirus SPN3USCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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