INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| KY705271 | Streptococcus phage P7574 | 36298 | 38.749 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST68757 | High-quality | High-quality | 98.240 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7574 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_25;antirepressor orf_27;cro orf_29 |
| KY705272 | Streptococcus phage P7601 | 35395 | 38.500 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST69760 | High-quality | High-quality | 96.590 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7601 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | cro orf_27 |
| KY705273 | Streptococcus phage P7602 | 37202 | 38.654 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST69760 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7602 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_26;cro orf_27 |
| KY705274 | Streptococcus phage P7631 | 36164 | 38.878 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST69763 | High-quality | High-quality | 97.540 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7631 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KY705275 | Streptococcus phage P7632 | 35988 | 39.096 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST69763 | High-quality | High-quality | 97.020 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7632 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KY705276 | Streptococcus phage P7633 | 35921 | 38.974 | Streptococcus | Group I | Moineauvirus | Moineauvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST69763 | High-quality | High-quality | 96.830 | AAI-based (high-confidence) | Moineauvirus | Moineauvirus P7633 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| KY705277 | Streptococcus phage P7951 | 34123 | 39.771 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST47795 | Medium-quality | Genome-fragment | 89.080 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P7951 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_27;cro orf_28 |
| KY705278 | Streptococcus phage P7952 | 37594 | 39.022 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST47795 | High-quality | High-quality | 99.450 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P7952 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | cro orf_30 |
| KY705279 | Streptococcus phage P7953 | 35786 | 39.071 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST47795 | High-quality | High-quality | 93.660 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P7953 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | antirepressor orf_28 |
| KY705280 | Streptococcus phage P7954 | 35688 | 38.862 | Streptococcus | Group I | Brussowvirus | Brussowvirus | Unclassified | Aliceevansviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus thermophilus ST47795 | High-quality | High-quality | 93.390 | AAI-based (high-confidence) | Brussowvirus | Brussowvirus P7954 | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | cro orf_28 |