INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads.

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Create interactive summaries of genome metadata and download the resulting figures.

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Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
KX581094	Vibrio phage pVa-2	53286	43.019	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain BA35	High-quality	High-quality	98.050	AAI-based (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_28
KX581095	Vibrio phage pVa-1	53227	43.021	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain BA35	Complete	High-quality	100.000	DTR (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_28
KX581096	Vibrio phage vB_VspP_pVa5_12Jun	53227	43.021	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain BA35	Complete	High-quality	100.000	DTR (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_28
KX581097	Vibrio phage pVa-6	53227	43.021	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain BA35	Complete	High-quality	100.000	DTR (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_28
KX581098	Vibrio phage VaK	53216	43.089	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain Kefalonia	Complete	High-quality	100.000	DTR (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_26
KX581099	Vibrio phage Strym	53226	43.022	Vibrio	Group I	Strymvirus	Strymvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain BA35	High-quality	High-quality	97.940	AAI-based (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_28
KX581100	Vibrio phage pVa-7	54268	43.064	Vibrio	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio anguillarum strain BA35	Complete	High-quality	100.000	DTR (high-confidence)	Strymvirus	Strymvirus strym	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_28
KX585251	Mycobacterium phage Waterfoul	61248	64.938	Mycobacterium	Group I	Kratiovirus	Kratiovirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	98.390	AAI-based (high-confidence)	Kratiovirus	Kratiovirus gengar	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_37;immunity orf_39;cro orf_40
KX585252	Mycobacterium phage HortumSL17	53426	62.649	Mycobacterium	Group I	Fromanvirus	Fromanvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	100.000	AAI-based (high-confidence)	Fromanvirus	Fromanvirus packman	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	parA orf_32;immunity orf_70
KX585253	Mycobacterium phage HedwigODU	59812	66.625	Mycobacterium	Group I	Anayavirus	Anayavirus	Weiservirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Mycobacterium smegmatis str. MC2 155	High-quality	High-quality	97.730	AAI-based (high-confidence)	Anayavirus	Anayavirus adephagia	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_40;immunity orf_42