INPHARED2 - BMCPR

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36350 matching reference genomes out of 36350. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
AP046641	Helicobacter pylori phage KHP30	26215	35.777	Helicobacter	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Helicobacter pylori	High-quality	High-quality	91.430	AAI-based (high-confidence)	Schmidvirus	Schmidvirus KHP30	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	cro orf_14;integrase orf_26
AY007505	Streptococcus phage SM1	34692	39.150	Streptococcus	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Streptococcus mitis SF100	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_1;cro orf_4;antirepressor orf_15;integrase orf_23;integrase orf_32
AY027935	Haemophilus phage HP2	31508	39.936	Haemophilus	Group I	Hpunavirus	Hpunavirus	Unclassified	Peduoviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	99.450	AAI-based (high-confidence)	Hpunavirus	Hpunavirus HP2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_1;cro orf_4
AY029185	Bordetella phage BPP-1	42493	65.408	Bordetella	Group I	Rauchvirus	Rauchvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	99.600	AAI-based (high-confidence)	Rauchvirus	Rauchvirus BPP1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	temperate	integrase orf_5;cro orf_31;integrase orf_50
AY048850	Saline Natrinema sp. J7-1 virus 1	16492	61.114	Natrinema	Group I	Yingchengvirus	Yingchengvirus	Unclassified	Simuloviridae	Halopanivirales	Laserviricetes	Dividoviricota	Helvetiavirae	Singelaviria	Natrinema sp. J7-1	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	lytic
AY052766	Salmonella phage ST64T	40679	47.523	Salmonella	Group I	Lederbergvirus	Lederbergvirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	99.110	AAI-based (high-confidence)	Lederbergvirus	Lederbergvirus ST64T	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_3;integrase orf_20;cro orf_26;antirepressor orf_27
AY055382	Salmonella phage ST64B	40149	51.015	Salmonella	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Salmonella enterica subsp. enterica serovar Typhimurium	High-quality	High-quality	100.000	AAI-based (high-confidence)	New_genus	New_species	Query is a new genus and species. You could try running again with if you larger distance	temperate	integrase orf_27
AY078382	Pseudomonas phage PaP3	45503	52.227	Pseudomonas	Group I	Bruynoghevirus	Bruynoghevirus	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Unspecified	High-quality	High-quality	100.000	AAI-based (high-confidence)	Bruynoghevirus	Bruynoghevirus PaP3	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
AY082070	Clostridium phage phi3626	33507	28.382	Clostridium	Group I	Unclassified	Unclassified	Unclassified	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Clostridium perfringens	High-quality	High-quality	98.590	AAI-based (high-confidence)	New_genus	New_species	No hits were found with the default settings	temperate	integrase orf_23;integrase orf_47
AY095314	Vibrio phage VpV262	46012	49.520	Vibrio	Group I	Vipivirus	Vipivirus	Unclassified	Zobellviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Vibrio parahaemolyticus	Complete	High-quality	100.000	DTR (high-confidence)	Vipivirus	Vipivirus canadense	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic