INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OQ627805 | Lactobacillus phage P185 | 39321 | 36.411 | Lactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus helveticus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_7 |
| OQ627806 | Lactobacillus phage S16 | 31477 | 36.363 | Lactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus helveticus | Medium-quality | Genome-fragment | 86.080 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ627807 | Lactobacillus phage S193 | 36440 | 35.793 | Lactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus helveticus | High-quality | High-quality | 99.660 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_53 |
| OQ627808 | Lactobacillus phage T280 | 35926 | 37.299 | Lactobacillus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Lactobacillus helveticus | High-quality | High-quality | 98.250 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_8 |
| OQ628262 | Aeromonas phage vB_AsaP_MQM1 | 63343 | 50.190 | Aeromonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Aeromonas salmonicida subsp. salmonicida | High-quality | High-quality | 95.520 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ632216 | Salmonella phage Arash | 180819 | 53.018 | Salmonella | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella enterica subsp. enterica serovar Typhimurium ATCC 14028 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | lytic | |
| OQ633420 | Pseudomonas phage PotUPM1 | 35685 | 66.420 | Pseudomonas | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas otitidis NK1 | Medium-quality | Genome-fragment | 87.500 | AAI-based (medium-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | integrase orf_5 |
| OQ633473 | Streptococcus phage vB_Sags-UPM1 | 42999 | 36.785 | Streptococcus | Group I | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Streptococcus agalactiae smyh01 | High-quality | High-quality | 98.070 | AAI-based (high-confidence) | New_genus | New_species | No hits were found with the default settings | temperate | antirepressor orf_50;integrase orf_55 |
| OQ646789 | Pseudomonas phage PA_LZ02 | 57243 | 65.984 | Pseudomonas | Group I | Pamexvirus | Pamexvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PAO1 | High-quality | High-quality | 93.420 | AAI-based (high-confidence) | Pamexvirus | Pamexvirus phiH1 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ646790 | Pseudomonas phage PA_LZ03 | 57367 | 63.353 | Pseudomonas | Group I | Abidjanvirus | Abidjanvirus | Bradleyvirinae | Mesyanzhinovviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa PA14 | High-quality | High-quality | 93.930 | AAI-based (high-confidence) | Abidjanvirus | Abidjanvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |