INPHARED2
INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OQ200059 | Pseudomonas phage vB_PaeM_B55 | 91901 | 49.365 | Pseudomonas | Group I | Pakpunavirus | Pakpunavirus | Skurskavirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa B55 | High-quality | High-quality | 98.820 | AAI-based (high-confidence) | Pakpunavirus | Pakpunavirus B55 | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ201593 | Mycobacterium phage RitVan | 42068 | 66.773 | Mycobacterium | Group I | Liefievirus | Liefievirus | Gclasvirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Mycolicobacterium smegmatis mc^2 155 | High-quality | High-quality | 96.860 | AAI-based (high-confidence) | Liefievirus | Liefievirus grizzly | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | integrase orf_32 |
| OQ210007 | Pseudomonas phage MK | 91920 | 49.457 | Pseudomonas | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Unclassified | Pseudomonas aeruginosa Paer36 | High-quality | High-quality | 98.840 | AAI-based (high-confidence) | Pakpunavirus | Pakpunavirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ210008 | Pseudomonas phage JS | 91095 | 49.264 | Pseudomonas | Group I | Pakpunavirus | Pakpunavirus | Skurskavirinae | Vandenendeviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Pseudomonas aeruginosa Paer42 | High-quality | High-quality | 97.950 | AAI-based (high-confidence) | Pakpunavirus | Pakpunavirus js | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic | |
| OQ221536 | Bacteroides phage PhiCrAssBcn1 | 99312 | 35.072 | Bacteroides | Group I | Kehishuvirus | Kehishuvirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides intestinalis DSM 108646 | Complete | High-quality | 100.000 | DTR (high-confidence) | Kehishuvirus | Kehishuvirus hominis | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ221537 | Bacteroides phage PhiCrAssBcn2 | 99311 | 35.079 | Bacteroides | Group I | Kehishuvirus | Kehishuvirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides intestinalis DSM 108646 | Complete | High-quality | 100.000 | DTR (high-confidence) | Kehishuvirus | Kehishuvirus hominis | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ221538 | Bacteroides phage PhiCrAssBcn3 | 99312 | 35.079 | Bacteroides | Group I | Kehishuvirus | Kehishuvirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides intestinalis DSM 108646 | Complete | High-quality | 100.000 | DTR (high-confidence) | Kehishuvirus | Kehishuvirus hominis | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ221539 | Bacteroides phage PhiCrAssBcn4 | 101446 | 35.180 | Bacteroides | Group I | Kehishuvirus | Kehishuvirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides intestinalis DSM 108646 | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Kehishuvirus | Kehishuvirus intestinalimedialis | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ221540 | Bacteroides phage PhiCrAssBcn5 | 101573 | 35.182 | Bacteroides | Group I | Kehishuvirus | Kehishuvirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides intestinalis DSM 108646 | Complete | High-quality | 100.000 | DTR (high-confidence) | Kehishuvirus | Kehishuvirus intestinalimedialis | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic | |
| OQ221541 | Bacteroides phage PhiCrAssBcn6 | 101578 | 35.183 | Bacteroides | Group I | Kehishuvirus | Kehishuvirus | Asinivirinae | Steigviridae | Crassvirales | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Bacteroides intestinalis DSM 108646 | Complete | High-quality | 100.000 | DTR (high-confidence) | Kehishuvirus | Kehishuvirus intestinalimedialis | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | lytic |