Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

Search INPHARED

Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OP172787Escherichia phage ECO07P416707535.408EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia fergusonii DO07CompleteHigh-quality100.000DTR (high-confidence) TequatrovirusTequatrovirus zeen18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP172788Escherichia phage ECO07P516756335.383EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia fergusonii DO07CompleteHigh-quality100.000DTR (high-confidence) TequatrovirusTequatrovirus zeen18Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP172789Escherichia phage ECO71P16815246.189EscherichiaGroup I WifcevirusWifcevirusUnclassifiedLindbergviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneri DO71CompleteHigh-quality100.000DTR (high-confidence) WifcevirusWifcevirus ECO71P1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP172790Escherichia phage ECO319P17533344.266EscherichiaGroup I CrifsvirusCrifsvirusUnclassifiedGrimontviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneri DA319CompleteHigh-quality100.000DTR (high-confidence) CrifsvirusCrifsvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP172791Escherichia phage ECO340P115111339.026EscherichiaGroup I PhapecoctavirusPhapecoctavirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneri DA340CompleteHigh-quality100.000DTR (high-confidence) PhapecoctavirusPhapecoctavirus Mt1B1P17Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP172792Escherichia phage ECO340P215199338.902EscherichiaGroup I PhapecoctavirusPhapecoctavirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Shigella flexneri DA340CompleteHigh-quality100.000DTR (high-confidence) PhapecoctavirusPhapecoctavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP172793Enterococcus phage EF36P13996834.795EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus_D gallinarum DO36CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
OP172794Enterococcus phage EF36P24019534.810EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus_D gallinarum DO36CompleteHigh-quality100.000DTR (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
OP172795Enterococcus phage EF36P33835634.717EnterococcusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Enterococcus_D gallinarum DO36High-qualityHigh-quality90.800AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
OP172796Escherichia phage EF202P18823438.901EscherichiaGroup I FelixounavirusFelixounavirusOunavirinaeAndersonviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli BSC202CompleteHigh-quality100.000DTR (high-confidence) FelixounavirusFelixounavirus EF202P1Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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