Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OP046317Escherichia phage PEC143726854.615EscherichiaGroup I DhillonvirusDhillonvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli APCE50Medium-qualityGenome-fragment83.330AAI-based (high-confidence) DhillonvirusDhillonvirus PEC14Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP053360Cyanophage S-TIM6617235740.917SynechococcusGroup I AurunvirusAurunvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. CC9605High-qualityHigh-quality100.000AAI-based (high-confidence) AurunvirusAurunvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP053361Cyanophage S-TIM6117161840.932SynechococcusGroup I AurunvirusAurunvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Synechococcus sp. CC9605High-qualityHigh-quality100.000AAI-based (high-confidence) AurunvirusAurunvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP053362Cyanophage S-TIM5417986041.716SynechococcusGroup I AurunvirusAurunvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Parasynechococcus marenigrum WH 8102High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesQuery is a new genus and species. You could try running again with if you larger distancelytic
OP056089Vibrio phage vB_VpaM_VPs205379345.026VibrioGroup I LiaoningvirusLiaoningvirusNefertitivirinaeChaseviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticusHigh-qualityHigh-quality100.000AAI-based (high-confidence) LiaoningvirusLiaoningvirus VPs20Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP056300Plectonema phage Pbo-yong34061752.370PlectonemaGroup I MorrisvirusMorrisvirusUnclassifiedSaffermanviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Leptolyngba boryana FACHB-402High-qualityHigh-quality99.220AAI-based (high-confidence) MorrisvirusMorrisvirus Pboyong3Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP066531Bacillus phage B133686434.831BacillusGroup I BunatrivirusBunatrivirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus cereus VKM B-13High-qualityHigh-quality91.670AAI-based (high-confidence) BunatrivirusBunatrivirus B13Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_27;antirepressor orf_33
OP067662Xanthomonas phage pXoo21074605260.990XanthomonasGroup I TsukubavirusTsukubavirusKantovirinaeAnamaviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Xanthomonas oryzae pv. oryzaeHigh-qualityHigh-quality96.560AAI-based (high-confidence) TsukubavirusTsukubavirus pxoo2107Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OP068330Microbacterium phage HerculesXL3941063.920MicrobacteriumGroup I NeferthenavirusNeferthenavirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224High-qualityHigh-quality96.730AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OP068331Microbacterium phage Viceroy6172466.966MicrobacteriumGroup I SquashvirusSquashvirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Microbacterium foliorum NRRL B-24224CompleteHigh-quality100.000DTR (high-confidence) SquashvirusSquashvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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