INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲	Description	Genome Length (bp)	molGC (%)	Host	Baltimore Group	Lowest Taxa	Genus	Sub-family	Family	Order	Class	Phylum	Kingdom	Realm	Isolation Host	CheckV quality	CheckV MIUVIG quality	CheckV completeness	CheckV completeness method	TaxMyPhage genus	TaxMyPhage species	TaxMyPhage message	PhageLeads lifestyle	PhageLeads problematic genes
ON185585	Escherichia phage EC148	107754	38.986	Escherichia	Group I	Tequintavirus	Tequintavirus	Markadamsvirinae	Demerecviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	95.360	AAI-based (high-confidence)	Tequintavirus	Tequintavirus EC148	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	lytic
ON185586	Escherichia phage EC125	50477	44.553	Escherichia	Group I	Warwickvirus	Warwickvirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Warwickvirus	Warwickvirus swan01	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON185587	Escherichia phage EC167	50988	44.179	Escherichia	Group I	Warwickvirus	Warwickvirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Warwickvirus	Warwickvirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON185588	Escherichia phage EC195	50477	44.553	Escherichia	Group I	Warwickvirus	Warwickvirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	100.000	AAI-based (high-confidence)	Warwickvirus	Warwickvirus swan01	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON185589	Escherichia phage EC147	46060	43.875	Escherichia	Group I	Hanrivervirus	Hanrivervirus	Tempevirinae	Drexlerviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Escherichia coli	High-quality	High-quality	91.490	AAI-based (high-confidence)	Hanrivervirus	Hanrivervirus EC147	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON189042	Xanthomonas phage Langgrundblatt1	44239	53.351	Xanthomonas	Group I	Shirevirus	Shirevirus	Stanbaylleyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas translucens pv. translucens (DSM 18974)	High-quality	High-quality	99.870	AAI-based (high-confidence)	Shirevirus	Shirevirus langgrundblatt1	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON189043	Xanthomonas phage Langgrundblatt2	44768	53.422	Xanthomonas	Group I	Shirevirus	Shirevirus	Stanbaylleyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas translucens pv. translucens (DSM 18974)	High-quality	High-quality	100.000	AAI-based (high-confidence)	Shirevirus	Shirevirus langgrundblatt2	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON189044	Xanthomonas phage Pfeifenkraut	43791	53.360	Xanthomonas	Group I	Shirevirus	Shirevirus	Stanbaylleyvirinae	Unclassified	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas translucens pv. translucens (DSM 18974)	High-quality	High-quality	99.010	AAI-based (high-confidence)	Shirevirus	Shirevirus pfeifenkraut	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic
ON189045	Xanthomonas phage Elanor	62341	64.535	Xanthomonas	Group I	Elanorvirus	Elanorvirus	Bradleyvirinae	Mesyanzhinovviridae	Unclassified	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas translucens pv. translucens (DSM 18974)	High-quality	High-quality	99.540	AAI-based (high-confidence)	Elanorvirus	Elanorvirus elanor	The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation	temperate	integrase orf_12
ON189046	Xanthomonas phage Laurelin	40498	57.452	Xanthomonas	Group I	Ghunavirus	Ghunavirus	Studiervirinae	Autotranscriptaviridae	Autographivirales	Caudoviricetes	Uroviricota	Heunggongvirae	Duplodnaviria	Xanthomonas translucens pv. translucens (DSM 18974)	High-quality	High-quality	99.570	AAI-based (high-confidence)	Ghunavirus	Ghunavirus new_name	Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level	lytic