INPHARED2
INPHARED2
INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.
Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026
Explore INPHARED2 data visually
Create interactive summaries of genome metadata and download the resulting figures.
Search INPHARED
Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.
37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.
INPHARED2 search results
The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.
| Accession ▲ | Description | Genome Length (bp) | molGC (%) | Host | Baltimore Group | Lowest Taxa | Genus | Sub-family | Family | Order | Class | Phylum | Kingdom | Realm | Isolation Host | CheckV quality | CheckV MIUVIG quality | CheckV completeness | CheckV completeness method | TaxMyPhage genus | TaxMyPhage species | TaxMyPhage message | PhageLeads lifestyle | PhageLeads problematic genes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OM439668 | Staphylococcus phage vB_SauS_713 | 42961 | 34.257 | Staphylococcus | Group I | Dubowvirus | Dubowvirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 99.750 | AAI-based (high-confidence) | Dubowvirus | Dubowvirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;cro orf_4;cro orf_5;antirepressor orf_6;integrase orf_31 |
| OM439669 | Staphylococcus phage vB_SauS_760 | 42788 | 35.351 | Staphylococcus | Group I | Phietavirus | Phietavirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 99.780 | AAI-based (high-confidence) | Phietavirus | Phietavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;cro orf_4;antirepressor orf_10;integrase orf_37 |
| OM439670 | Staphylococcus phage vB_SauS_775 | 43321 | 33.910 | Staphylococcus | Group I | Dubowvirus | Dubowvirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Dubowvirus | Dubowvirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;cro orf_3;cro orf_4;antirepressor orf_7 |
| OM439671 | Staphylococcus phage vB_SauS_832 | 43499 | 34.070 | Staphylococcus | Group I | Dubowvirus | Dubowvirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Dubowvirus | Dubowvirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;cro orf_5;cro orf_6;antirepressor orf_7;integrase orf_39 |
| OM439672 | Staphylococcus phage vB_SauS_I73 | 43575 | 35.094 | Staphylococcus | Group I | Phietavirus | Phietavirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Phietavirus | Phietavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;antirepressor orf_8;antirepressor orf_12;integrase orf_36 |
| OM439673 | Staphylococcus phage vB_SauS_Mh1 | 43800 | 35.091 | Staphylococcus | Group I | Phietavirus | Phietavirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Phietavirus | Phietavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;cro orf_5;antirepressor orf_10;integrase orf_42 |
| OM439674 | Staphylococcus phage vB_SauS_Mh15 | 43090 | 35.259 | Staphylococcus | Group I | Phietavirus | Phietavirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Phietavirus | Phietavirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;antirepressor orf_7;integrase orf_41 |
| OM439675 | Staphylococcus phage vB_SauS_Mh4 | 44199 | 34.648 | Staphylococcus | Group I | Dubowvirus | Dubowvirus | Azeredovirinae | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Staphylococcus aureus | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Dubowvirus | Dubowvirus new_name | The number of expected genera is different from the predicted number of genus clusters. It will require more manual curation | temperate | integrase orf_1;cro orf_4;antirepressor orf_11;antirepressor orf_13 |
| OM456492 | Salmonella phage SaP7 | 240613 | 48.418 | Salmonella | Group I | Seoulvirus | Seoulvirus | Unclassified | Chimalliviridae | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Salmonella sp. | High-quality | High-quality | 97.920 | AAI-based (high-confidence) | Seoulvirus | Seoulvirus SPN3US | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | temperate | antirepressor orf_109 |
| OM457001 | Serratia phage SP1 | 168080 | 42.102 | Serratia | Group I | Muldoonvirus | Muldoonvirus | Unclassified | Unclassified | Unclassified | Caudoviricetes | Uroviricota | Heunggongvirae | Duplodnaviria | Unspecified | High-quality | High-quality | 100.000 | AAI-based (high-confidence) | Muldoonvirus | Muldoonvirus new_name | Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus level | lytic |