Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OM339718Aeromonas phage P1922823638.799AeromonasGroup I CeceduovirusCeceduovirusEmmerichvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Aeromonas dhakensisHigh-qualityHigh-quality96.320AAI-based (high-confidence) CeceduovirusCeceduovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM350011Bacillus phage BillyBob16542937.772BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus thuringiensis subspecies kurstakiCompleteHigh-quality100.000DTR (high-confidence) BequatrovirusBequatrovirus rileyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM350012Bacillus phage Darren16091638.723BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus thuringiensis subspecies kurstakiCompleteHigh-quality100.000DTR (high-confidence) WphvirusWphvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM350013Bacillus phage MrBubbles16158138.680BacillusGroup I WphvirusWphvirusBastillevirinaeHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus thuringiensis subspecies kurstakiCompleteHigh-quality100.000DTR (high-confidence) WphvirusWphvirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM355495Escherichia phage ZH43949649.711EscherichiaGroup I KayfunavirusKayfunavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coli GXEC-H4CompleteHigh-quality100.000DTR (high-confidence) KayfunavirusKayfunavirus ZH4The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM362522Vibrio phage vB_VpaP_GHSM174322849.429VibrioGroup I MaculvirusMaculvirusUnclassifiedAutoscriptoviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Vibrio parahaemolyticus OY49High-qualityHigh-quality99.670AAI-based (high-confidence) MaculvirusMaculvirus GHSM17Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM362897Escherichia phage SKA6415240139.245EscherichiaGroup I PhapecoctavirusPhapecoctavirusStephanstirmvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality100.000AAI-based (high-confidence) PhapecoctavirusPhapecoctavirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM367911Salmonella phage PLL115661344.722SalmonellaGroup I KuttervirusKuttervirusCvivirinaeAckermannviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Salmonella enterica subsp. entericaHigh-qualityHigh-quality99.090AAI-based (high-confidence) KuttervirusKuttervirus dinkyCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM373202Cylindrospermopsis phage Cr-LKS34625166.275CylindrospermopsisGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Cylindrospermopsis raciborskii KLL06High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_24
OM373206Bacillus phage MAC2411012130.025BacillusUnclassified UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassified Bacillus cereus ATCC 19637Medium-qualityGenome-fragment70.200HMM-based (lower-bound) New_genusNew_speciesNo hits were found with the default settingstemperateintegrase orf_34
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