Becky Mayer Centre for Phage Research
BMCPR PhageBank
INPHARED2

INPHARED2

INPHARED2 is the new home of the INPHARED resource, providing a curated, regularly updated set of complete bacteriophage genomes with associated metadata and genome quality information, including CheckV assessments and taxonomy generated using taxMyPhage.

Building on the original database, INPHARED2 provides an expanded and improved reference resource for phage genomics; the updated resource and analysis are described in our INPHARED2 preprint. It provides an easy-to-use online search function alongside bulk data downloads. The online database was last updated on 03 October 2026

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Search by accession, description, host or taxonomy. The filters below reflect the initial INPHARED2 display specification.

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37654 matching reference genomes out of 37654. Search and filters are active; download will follow after the fields are finalised.

INPHARED2 search results

The results table contains the selected original taxonomy, CheckV, TaxMyPhage and PhageLeads fields. It can be scrolled horizontally for the full record.

Accession ▲ Description Genome Length (bp) molGC (%) Host Baltimore Group Lowest Taxa Genus Sub-family Family Order Class Phylum Kingdom Realm Isolation Host CheckV quality CheckV MIUVIG quality CheckV completeness CheckV completeness method TaxMyPhage genus TaxMyPhage species TaxMyPhage message PhageLeads lifestyle PhageLeads problematic genes
OM105885Mycobacterium phage Madiba5605661.405MycobacteriumGroup I CheoctovirusCheoctovirusGracegardnervirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Mycobacterium smegmatis str. MC2 155High-qualityHigh-quality97.200AAI-based (high-confidence) CheoctovirusCheoctovirus new_nameThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationtemperateintegrase orf_36;immunity orf_38;antirepressor orf_39
OM105886Gordonia phage Ligma6171470.185GordoniaGroup I LigmavirusLigmavirusDurvirinaeUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Gordonia terrae NRRL B-16283High-qualityHigh-quality100.000AAI-based (high-confidence) LigmavirusLigmavirus ligmaThe number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM112209Bacillus phage PK14143139.393BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus sp. (in: Bacteria)High-qualityHigh-quality100.000AAI-based (high-confidence) New_genusNew_speciesNo hits were found with the default settingstemperateantirepressor orf_32
OM112210Bacillus phage PK25939942.513BacillusGroup I UnclassifiedUnclassifiedUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Bacillus sp. (in: Bacteria)High-qualityHigh-quality100.000AAI-based (medium-confidence) New_genusNew_speciesNo hits were found with the default settingslytic
OM131411Pseudomonas phage Pf17397_F_PD14076356.392PseudomonasGroup I PijolavirusPijolavirusStudiervirinaeAutotranscriptaviridaeAutographiviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas sp.CompleteHigh-quality100.000DTR (high-confidence) PijolavirusPijolavirus Pf17397FPD1The number of expected genera is different from the predicted number of genus clusters. It will require more manual curationlytic
OM135583Escherichia phage EP0116557735.436EscherichiaGroup I TequatrovirusTequatrovirusTevenvirinaeStraboviridaePantevenviralesCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Escherichia coliHigh-qualityHigh-quality98.370AAI-based (high-confidence) TequatrovirusTequatrovirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM135608Serratia phage vB_SmaS_Bonzee4204546.108SerratiaGroup I BonzeevirusBonzeevirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Serratia marcescensHigh-qualityHigh-quality100.000AAI-based (medium-confidence) BonzeevirusBonzeevirus bonzeeCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM135992Brochothrix phage ADU412781941.646BrochothrixGroup I KlumppvirusKlumppvirusUnclassifiedHerelleviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Brochothrix thermosphactaHigh-qualityHigh-quality100.000AAI-based (high-confidence) KlumppvirusKlumppvirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
OM140653Yersinia phage vB_YenM_31.173294948.973YersiniaGroup I GraikaemvirusGraikaemvirusUnclassifiedPeduoviridaeUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Yersinia enterocoliticaHigh-qualityHigh-quality100.000AAI-based (high-confidence) GraikaemvirusGraikaemvirus YenM3117Current ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus leveltemperateintegrase orf_2
OM140839Pseudomonas phage ZY2111200656.453PseudomonasGroup I NickievirusNickievirusUnclassifiedUnclassifiedUnclassifiedCaudoviricetesUroviricotaHeunggongviraeDuplodnaviria Pseudomonas syringae pv. actinidiaeHigh-qualityHigh-quality99.860AAI-based (high-confidence) NickievirusNickievirus new_nameCurrent ICTV taxonomy and the clustering on genomic similarity algorithm output appear to be consistent at the genus levellytic
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